RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 TGFB2P61812 414 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 KCNV1Q6PIU1 500 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 SV2AQ7L0J3 742 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 GPR141Q7Z602 305 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 CCDC60Q8IWA6 550 aaPredicted RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 IL31RAQ8NI17 732 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 PBXIP1Q96AQ6 731 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 CYFIP2Q96F07 1278 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 MED15Q96RN5 788 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 NRDE2Q9H7Z3 1164 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 ZNF446Q9NWS9 450 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 FRMPD4Q14CM0 1322 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 ENO1P06733 434 aaKnown RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 CYP11B1P15538 503 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 RFC5P40937 340 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 RGS7P49802 495 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 SERPINH1P50454 418 aaKnown RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 AP3M2P53677 418 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 MEI1Q5TIA1 1274 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 ATF7IP2Q5U623 682 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 KLC3Q6P597 504 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 DSTYKQ6XUX3 929 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 TAS2R42Q7RTR8 314 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 ZBED8Q8IZ13 594 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 KIF2BQ8N4N8 673 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 ACSF2Q96CM8 615 aaPredicted RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 B3GALT6Q96L58 329 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 C17orf75Q9HAS0 396 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 UBN1Q9NPG3 1134 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 TUBA8Q9NY65 449 aaPredicted RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 BRAFP15056 766 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 SDC4P31431 198 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 SNRPFP62306 86 aaKnown RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 TP53BP2Q13625 1128 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 SGSM1Q2NKQ1 1148 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 KLHL12Q53G59 568 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 RUBCNQ92622 972 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 C18orf8Q96DM3 657 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 ACAP3Q96P50 834 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 ISCUQ9H1K1 167 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 ZFATQ9P243 1243 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 AP4S1Q9Y587 144 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 A8MXQ7 604 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 GRAP2O75791 330 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 MYCP01106 439 aaPredicted RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 SRGAP2BP0DMP2 458 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 PTK2BQ14289 1009 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 TRIP4Q15650 581 aaPredicted RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 ARSHQ5FYA8 562 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 ARMC4Q5T2S8 1044 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 ARHGEF19Q8IW93 802 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 CCNYL1Q8N7R7 359 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 ATL2Q8NHH9 583 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 RIN3Q8TB24 985 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 TATDN2Q93075 761 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 SHISA4Q96DD7 197 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 C9orf72Q96LT7 481 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 ERP44Q9BS26 406 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 TRIM45Q9H8W5 580 aaPredicted RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 CYLDQ9NQC7 956 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 SNX9Q9Y5X1 595 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 PDE2AO00408 941 aaPredicted RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 DDX3XO00571 662 aaKnown RBP eCLIP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 DYNC1LI2O43237 492 aaPredicted RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 SLC1A1P43005 524 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 OTUD4Q01804 1114 aaKnown RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 LGALS3BPQ08380 585 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 PDIA2Q13087 525 aaKnown RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 ORC1Q13415 861 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 KRT72Q14CN4 511 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 SMAD1Q15797 465 aaKnown RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 GPAT2Q6NUI2 795 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 TTC33Q6PID6 262 aaPredicted RBP11.26□□□□□ -0.61
CPNE4-209ENST00000512055 UTS2BQ765I0 119 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 BEST2Q8NFU1 509 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 GLMNQ92990 594 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 SENP7Q9BQF6 1050 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 PDCD10Q9BUL8 212 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 TMEM161AQ9NX61 479 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 CASZ1Q86V15 1759 aa11.26□□□□□ -0.61
CPNE4-209ENST00000512055 CSDE1O75534 798 aaKnown RBP11.25□□□□□ -0.61
CPNE4-209ENST00000512055 ITGA4P13612 1032 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 RECQLP46063 649 aaPredicted RBP11.25□□□□□ -0.61
CPNE4-209ENST00000512055 CDH6P55285 790 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 ARL4CP56559 192 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 CNTN2Q02246 1040 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 CYP4A22Q5TCH4 519 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 C1orf228Q6PIY5 440 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 ARMCX2Q7L311 632 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 PAIP1Q9H074 479 aaKnown RBP11.25□□□□□ -0.61
CPNE4-209ENST00000512055 SLC40A1Q9NP59 571 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 MAP3K20Q9NYL2 800 aaKnown RBP11.25□□□□□ -0.61
CPNE4-209ENST00000512055 REXO2Q9Y3B8 237 aaKnown RBP11.25□□□□□ -0.61
CPNE4-209ENST00000512055 TRIM24O15164 1050 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 HUS1O60921 280 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 CLCN3P51790 818 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 DLG4P78352 724 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 TFDP2Q14188 446 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 INPP5AQ14642 412 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 SLC35G1Q2M3R5 365 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms