RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 SWAP70Q9UH65 585 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 CRYL1Q9Y2S2 319 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 MTO1Q9Y2Z2 717 aaKnown RBP3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 CDY1Q9Y6F8 540 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 GOLGA3Q08378 1498 aa3.73□□□□□ -1.81
TRAPPC11-205ENST00000506426 CTTNBP2Q8WZ74 1663 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 FHOD3Q2V2M9 1422 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 MAGI3Q5TCQ9 1506 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 FCHO1O14526 889 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 DCLK1O15075 740 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 RGS10O43665 173 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 RRP9O43818 475 aaKnown RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 CCNT2O60583 730 aaKnown RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 TRIM13O60858 407 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 FAM155BO75949 473 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 USP1O94782 785 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 ACTL6BO94805 426 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 RASAL1O95294 804 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 PECAM1P16284 738 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 HK1P19367 917 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 CST5P28325 142 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 CASP2P42575 452 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 PXNP49023 591 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 PAPOLAP51003 745 aaKnown RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 DGKEP52429 567 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 EPHB4P54760 987 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 ALDH18A1P54886 795 aaKnown RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 CTSWP56202 376 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 GEMIN4P57678 1058 aaKnown RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 LOXL3P58215 753 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 LILRA4P59901 499 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 G3BP1Q13283 466 aaKnown RBP eCLIP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 BOP1Q14137 746 aaKnown RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 KCNAB1Q14722 419 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 DCAF17Q5H9S7 520 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 ATPAF1Q5TC12 328 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 NT5DC1Q5TFE4 455 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 TSHZ3Q63HK5 1081 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 SLFN13Q68D06 897 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 TAF2Q6P1X5 1199 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 MAATS1Q7Z4T9 603 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 RASGRP3Q8IV61 690 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 GSPT2Q8IYD1 628 aaKnown RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 D2HGDHQ8N465 521 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 MB21D1Q8N884 522 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 NSUN7Q8NE18 718 aaKnown RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 POC1BQ8TC44 478 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 BPIFB1Q8TDL5 484 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 RSC1A1Q92681 617 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 PPP2R3CQ969Q6 453 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 FAM227BQ96M60 508 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 OR14A2Q96R54 314 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 MED15Q96RN5 788 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 RBM15Q96T37 977 aaKnown RBP eCLIP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 NELL2Q99435 816 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 PYM1Q9BRP8 204 aaKnown RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 SLC46A2Q9BY10 475 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 TP63Q9H3D4 680 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 RIC8AQ9NPQ8 531 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 DNMT3BQ9UBC3 853 aaKnown RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 SRP68Q9UHB9 627 aaKnown RBP3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 HPSEQ9Y251 543 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 SH3BP1Q9Y3L3 701 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 NEU2Q9Y3R4 380 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 DTNAQ9Y4J8 743 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 HS3ST4Q9Y661 456 aa3.72□□□□□ -1.81
TRAPPC11-205ENST00000506426 A0A0B4J269 797 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 HMX3A6NHT5 357 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 E7ENX8 843 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 EYA2O00167 538 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 DNPH1O43598 174 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 NUAK1O60285 661 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 NTSR2O95665 410 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 HLA-DOAP06340 250 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 CENPBP07199 599 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 SPATA31D3P0C874 917 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 SRGAP2BP0DMP2 458 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 CHRM3P20309 590 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 HOXA5P20719 270 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 TNFAIP3P21580 790 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 SLC5A2P31639 672 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 MSX2P35548 267 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 ADD2P35612 726 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 TOB1P50616 345 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 PRKAG1P54619 331 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 AP2B1P63010 937 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 TAP2Q03519 686 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 EFR3AQ14156 821 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 SIM2Q14190 667 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 FAM110CQ1W6H9 321 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 LIN54Q6MZP7 749 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 RETSATQ6NUM9 610 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 FOXR2Q6PJQ5 311 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 SPATA31D4Q6ZUB0 917 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 RSRC2Q7L4I2 434 aaKnown RBP3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 KCTD20Q7Z5Y7 419 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 TTC30AQ86WT1 665 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 TICAM2Q86XR7 235 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZNF280BQ86YH2 543 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 SLC44A2Q8IWA5 706 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms