RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 NEK11Q8NG66 645 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 SUSD6Q92537 303 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 PIWIL1Q96J94 861 aaKnown RBP5.24□□□□□ -1.57
LMNB1-208ENST00000504788 TNIP3Q96KP6 325 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 SPATA17Q96L03 361 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 C8orf48Q96LL4 319 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 CDCA3Q99618 268 aaPredicted RBP5.24□□□□□ -1.57
LMNB1-208ENST00000504788 CHP1Q99653 195 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 NUP58Q9BVL2 599 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 TTLL2Q9BWV7 592 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 SLC4A5Q9BY07 1137 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 DUSP16Q9BY84 665 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 TRIM5Q9C035 493 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 LHX5Q9H2C1 402 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 PLEKHA4Q9H4M7 779 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 PNPLA8Q9NP80 782 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 MAN1C1Q9NR34 630 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 ABHD10Q9NUJ1 306 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 PLA2G2EQ9NZK7 142 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 KIAA1257Q9ULG3 409 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 SLC27A5Q9Y2P5 690 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 YIPF1Q9Y548 306 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 PCDHB4Q9Y5E5 795 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 PES1O00541 588 aaKnown RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 DDX3XO00571 662 aaKnown RBP eCLIP5.23□□□□□ -1.578e-31■■■□□ 15.3
LMNB1-208ENST00000504788 CBFA2T2O43439 604 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 GFPT2O94808 682 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 MICAL2O94851 1124 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 LCA5LO95447 670 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 GLUD1P00367 558 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 C8AP07357 584 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 CPB1P15086 417 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 NPR3P17342 541 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 GNA15P30679 374 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 SSTR3P32745 418 aaPredicted RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 KRT9P35527 623 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 GABRB2P47870 512 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 KIF11P52732 1056 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 ADKP55263 362 aaKnown RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 ZXDBP98169 803 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 CDR2Q01850 454 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 EIF4EBP2Q13542 120 aaPredicted RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 MTMR3Q13615 1198 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 RAPGEF1Q13905 1077 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 PTPROQ16827 1216 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 DDR2Q16832 855 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 SLC5A9Q2M3M2 681 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 PTPN20Q4JDL3 420 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 SGO2Q562F6 1265 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 PRSS36Q5K4E3 855 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 ARTNQ5T4W7 220 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 SDHAF4Q5VUM1 108 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 PM20D1Q6GTS8 502 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 DENND1BQ6P3S1 775 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 GAREM2Q75VX8 874 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 TMEM110Q86TL2 294 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 PIGZQ86VD9 579 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 PPFIBP1Q86W92 1011 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 METTL23Q86XA0 190 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 ZNF677Q86XU0 584 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 GPIHBP1Q8IV16 184 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 DRC7Q8IY82 874 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 C12orf76Q8N812 135 aaPredicted RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 CCDC150Q8NCX0 1101 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 SCAMP5Q8TAC9 235 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 SLC7A14Q8TBB6 771 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 KCTD13Q8WZ19 329 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 IQCDQ96DY2 449 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 TRMT2BQ96GJ1 504 aaKnown RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 SMARCD1Q96GM5 515 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 CEP295NLQ96MC4 621 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 CPXM1Q96SM3 734 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 EMILIN2Q9BXX0 1053 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 ADAM33Q9BZ11 813 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 UBXN6Q9BZV1 441 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 SNX25Q9H3E2 840 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 HAUS4Q9H6D7 363 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 TLE6Q9H808 572 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 ZNF334Q9HCZ1 680 aaPredicted RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 AVENQ9NQS1 362 aaPredicted RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 KRT82Q9NSB4 513 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 HCFC1R1Q9NWW0 138 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 OSER1Q9NX31 292 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 ZDHHC7Q9NXF8 308 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 TAS2R14Q9NYV8 317 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 DNMT3BQ9UBC3 853 aaKnown RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 PCDHB5Q9Y5E4 795 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 A0A087X0T9 212 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 GOLGA6L3A6NEY3 463 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 GRXCR2A6NFK2 248 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 XPO1O14980 1071 aaKnown RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 PAPSS1O43252 624 aaPredicted RBP5.23□□□□□ -1.57
LMNB1-208ENST00000504788 OLFM2O95897 454 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 F11P03951 625 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 TPM2P07951 284 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 FAM228BP0C875 321 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 PYGBP11216 843 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 SKILP12757 684 aa5.23□□□□□ -1.57
LMNB1-208ENST00000504788 MMP8P22894 467 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms