RNA–Protein interactions for RNA: ENST00000504331.1

OTUD4-204, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 591 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-204ENST00000504331 CCDC60Q8IWA6 550 aaPredicted RBP5.56□□□□□ -1.52
OTUD4-204ENST00000504331 CAMKK1Q8N5S9 505 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 PAF1Q8N7H5 531 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 TRAPPC12Q8WVT3 735 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 TCP11Q8WWU5 503 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 RSAD2Q8WXG1 361 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 FGF13Q92913 245 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 RILPL2Q969X0 211 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 ZNF707Q96C28 371 aaPredicted RBP5.56□□□□□ -1.52
OTUD4-204ENST00000504331 ZC3H10Q96K80 434 aaKnown RBP5.56□□□□□ -1.52
OTUD4-204ENST00000504331 ZNF577Q9BSK1 485 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 TRMT61BQ9BVS5 477 aaKnown RBP5.56□□□□□ -1.52
OTUD4-204ENST00000504331 FOXQ1Q9C009 403 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 C12orf49Q9H741 205 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 ZFP14Q9HCL3 533 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 VPS45Q9NRW7 570 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 SFMBT1Q9UHJ3 866 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 TPCN1Q9ULQ1 816 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 SAMM50Q9Y512 469 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 PCDHB2Q9Y5E7 798 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 GREB1Q4ZG55 1949 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 GPR179Q6PRD1 2367 aa5.56□□□□□ -1.52
OTUD4-204ENST00000504331 FASNP49327 2511 aaKnown RBP5.55□□□□□ -1.52
OTUD4-204ENST00000504331 LAMA4Q16363 1823 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 SF3B1O75533 1304 aaKnown RBP eCLIP5.55□□□□□ -1.52
OTUD4-204ENST00000504331 DMXL1Q9Y485 3027 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 CCDC196A0A1B0GTZ2 297 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 ESYT2A0FGR8 921 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 IFRD1O00458 451 aaPredicted RBP5.55□□□□□ -1.52
OTUD4-204ENST00000504331 TRAPPC3O43617 180 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 TADA2AO75478 443 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 RHOBTB1O94844 696 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 SLFN14P0C7P3 912 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 TDGF1P13385 188 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 ITGA4P13612 1032 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 PTPN2P17706 415 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 PSMC3P17980 439 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 CD53P19397 219 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 CIITAP33076 1130 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 MCM5P33992 734 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 PBX3P40426 434 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 EPHB1P54762 984 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 DSC1Q08554 894 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 IFRD2Q12894 506 aaPredicted RBP5.55□□□□□ -1.52
OTUD4-204ENST00000504331 MTAPQ13126 283 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 RAB33AQ14088 237 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 MXD4Q14582 209 aaPredicted RBP5.55□□□□□ -1.52
OTUD4-204ENST00000504331 TARBP2Q15633 366 aaKnown RBP5.55□□□□□ -1.52
OTUD4-204ENST00000504331 ZNF280DQ6N043 979 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 NOTUMQ6P988 496 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 PARM1Q6UWI2 310 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 CWC27Q6UX04 472 aaKnown RBP5.55□□□□□ -1.52
OTUD4-204ENST00000504331 TPRG1Q6ZUI0 275 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 ANKS3Q6ZW76 656 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 CEP68Q76N32 757 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 GET4Q7L5D6 327 aaPredicted RBP5.55□□□□□ -1.52
OTUD4-204ENST00000504331 WDR5BQ86VZ2 330 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 COLGALT2Q8IYK4 626 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 ELMOD1Q8N336 334 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 LSM14AQ8ND56 463 aaKnown RBP5.55□□□□□ -1.52
OTUD4-204ENST00000504331 IGDCC4Q8TDY8 1250 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 FAM3CQ92520 227 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 FGF14Q92915 247 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 SLC32A1Q9H598 525 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 BRD9Q9H8M2 597 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 LIN7BQ9HAP6 207 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 LMAN1LQ9HAT1 526 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 TRPV4Q9HBA0 871 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 AGPAT5Q9NUQ2 364 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 CDH22Q9UJ99 828 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 FBXW11Q9UKB1 542 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 ADAM28Q9UKQ2 775 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 PIN4Q9Y237 131 aaKnown RBP5.55□□□□□ -1.52
OTUD4-204ENST00000504331 NEUROG3Q9Y4Z2 214 aa5.55□□□□□ -1.52
OTUD4-204ENST00000504331 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.55□□□□□ -1.52
OTUD4-204ENST00000504331 SPAG17Q6Q759 2223 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 MYOCOSA0A1B0GUC4 107 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 FAM221BA6H8Z2 402 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 EIF4E1BA6NMX2 242 aaKnown RBP5.54□□□□□ -1.52
OTUD4-204ENST00000504331 ALG1L2C9J202 215 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 OVOL3O00110 214 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 TAF4O00268 1085 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 GIPC1O14908 333 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 MAFO75444 373 aaPredicted RBP5.54□□□□□ -1.52
OTUD4-204ENST00000504331 RFPL2O75678 378 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 EPN2O95208 641 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 BDNFP23560 247 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 CALRP27797 417 aaKnown RBP5.54□□□□□ -1.52
OTUD4-204ENST00000504331 ELF1P32519 619 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 EIF1AXP47813 144 aaKnown RBP5.54□□□□□ -1.52
OTUD4-204ENST00000504331 OR1G1P47890 313 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 MASP1P48740 699 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 CLCN3P51790 818 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 ADCY7P51828 1080 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 EFEMP1Q12805 493 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 GRIK3Q13003 919 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 ITGB3BPQ13352 177 aaPredicted RBP5.54□□□□□ -1.52
OTUD4-204ENST00000504331 ELF2Q15723 593 aa5.54□□□□□ -1.52
OTUD4-204ENST00000504331 PABPC1LQ4VXU2 614 aaKnown RBP5.54□□□□□ -1.52
OTUD4-204ENST00000504331 CYP4A22Q5TCH4 519 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms