RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 MMGT1Q8N4V1 131 aa8.88□□□□□ -0.99
SF3A1-210ENST00000498259 COG1Q8WTW3 980 aa8.88□□□□□ -0.99
SF3A1-210ENST00000498259 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.88□□□□□ -0.99
SF3A1-210ENST00000498259 IRGQQ8WZA9 623 aa8.88□□□□□ -0.99
SF3A1-210ENST00000498259 TOP1MTQ969P6 601 aa8.88□□□□□ -0.99
SF3A1-210ENST00000498259 TBCBQ99426 244 aa8.88□□□□□ -0.99
SF3A1-210ENST00000498259 PSMB7Q99436 277 aa8.88□□□□□ -0.99
SF3A1-210ENST00000498259 HTATIP2Q9BUP3 242 aa8.88□□□□□ -0.99
SF3A1-210ENST00000498259 DPEP3Q9H4B8 488 aa8.88□□□□□ -0.99
SF3A1-210ENST00000498259 SLITRK6Q9H5Y7 841 aa8.88□□□□□ -0.99
SF3A1-210ENST00000498259 NRDE2Q9H7Z3 1164 aa8.88□□□□□ -0.99
SF3A1-210ENST00000498259 PRDM16Q9HAZ2 1276 aa8.88□□□□□ -0.99
SF3A1-210ENST00000498259 DMAP1Q9NPF5 467 aaPredicted RBP8.88□□□□□ -0.99
SF3A1-210ENST00000498259 RNF19AQ9NV58 838 aa8.88□□□□□ -0.99
SF3A1-210ENST00000498259 RASAL2Q9UJF2 1139 aa8.88□□□□□ -0.99
SF3A1-210ENST00000498259 PACSIN2Q9UNF0 486 aaPredicted RBP8.88□□□□□ -0.99
SF3A1-210ENST00000498259 EFR3BQ9Y2G0 817 aa8.88□□□□□ -0.99
SF3A1-210ENST00000498259 PDCD11Q14690 1871 aaKnown RBP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 TCRBV5S1A1TA0A578 114 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 DPYSL4O14531 572 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 NDC80O14777 642 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 CAPN9O14815 690 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 ZNF185O15231 689 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 DDX3YO15523 660 aaKnown RBP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 PRPSAP2O60256 369 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 ZNF189O75820 626 aaPredicted RBP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 DGKIO75912 1065 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 DDHD2O94830 711 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 F9P00740 461 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 FGGP02679 453 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 CCDC130P13994 396 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 LAG3P18627 525 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 ACAT1P24752 427 aaKnown RBP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 RFC1P35251 1148 aaPredicted RBP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 PEX5P50542 639 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 AIF1P55008 147 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 RNASE9P60153 205 aaKnown RBP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 RPL7AP62424 266 aaKnown RBP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 YWHAZP63104 245 aaKnown RBP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 KRT17Q04695 432 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 GPNMBQ14956 572 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 BRD3Q15059 726 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 ERCC6LQ2NKX8 1250 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 USP41Q3LFD5 358 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 CTXN3Q4LDR2 81 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 FAM171A1Q5VUB5 890 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 PSRC1Q6PGN9 363 aaPredicted RBP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 SND1Q7KZF4 910 aaKnown RBP eCLIP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 FAM35AQ86V20 835 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 PIGZQ86VD9 579 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 TTC30AQ86WT1 665 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 VSIG1Q86XK7 387 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 PSTKQ8IV42 348 aaKnown RBP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 SCUBE3Q8IX30 993 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 IFT20Q8IY31 132 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 CRIPAKQ8N1N5 446 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 SCML4Q8N228 414 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 ARHGAP18Q8N392 663 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 TTC13Q8NBP0 860 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 C3orf58Q8NDZ4 430 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 DIS3LQ8TF46 1054 aaKnown RBP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 GRK7Q8WTQ7 553 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 CD101Q93033 1021 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 PCED1BQ96HM7 432 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 MAK16Q9BXY0 300 aaKnown RBP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 FRMD8P1Q9BZ68 369 aaPredicted RBP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 OSBPL7Q9BZF2 842 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 RAB17Q9H0T7 212 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 FBXO44Q9H4M3 255 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 CSNK1G1Q9HCP0 422 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 IL23AQ9NPF7 189 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 METTL5Q9NRN9 209 aaKnown RBP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 KRT82Q9NSB4 513 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 COMMD8Q9NX08 183 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 MAFFQ9ULX9 164 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 USTQ9Y2C2 406 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 PRG3Q9Y2Y8 225 aaPredicted RBP8.87□□□□□ -0.99
SF3A1-210ENST00000498259 PCDHB5Q9Y5E4 795 aa8.87□□□□□ -0.99
SF3A1-210ENST00000498259 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.86□□□□□ -0.99
SF3A1-210ENST00000498259 MYBPHLA2RUH7 354 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 C2CD4BA6NLJ0 364 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 UPP2O95045 317 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 FGBP02675 491 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 GALTP07902 379 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 LCP1P13796 627 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 CHRNA3P32297 505 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 NOS2P35228 1153 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 GRIK1P39086 918 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 MATKP42679 507 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 MAGEA11P43364 429 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 PTPN9P43378 593 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 BRCC3P46736 316 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 RGS7P49802 495 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 TKTL1P51854 596 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 ZNF135P52742 658 aaPredicted RBP8.86□□□□□ -0.99
SF3A1-210ENST00000498259 BCAR1P56945 870 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 MAP3K7CLP57077 242 aa8.86□□□□□ -0.99
SF3A1-210ENST00000498259 RPL10AP62906 217 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms