RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 GDI1P31150 447 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 GBP1P32455 592 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 NAP1L1P55209 391 aaKnown RBP9.02□□□□□ -0.97
VPS13B-206ENST00000496144 MAP9Q49MG5 647 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 PRSS55Q6UWB4 352 aaPredicted RBP9.02□□□□□ -0.97
VPS13B-206ENST00000496144 SMRP1Q8NCR6 262 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 LMO3Q8TAP4 145 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 GANCQ8TET4 914 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 XPO6Q96QU8 1125 aaKnown RBP9.02□□□□□ -0.97
VPS13B-206ENST00000496144 SYNCQ9H7C4 482 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 VIPAS39Q9H9C1 493 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 HSPBP1Q9NZL4 362 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 DNAJC12Q9UKB3 198 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 TBX20Q9UMR3 447 aa9.02□□□□□ -0.97
VPS13B-206ENST00000496144 TYMPP19971 482 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 DLG4P78352 724 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 ADAM17P78536 824 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 TWF1Q12792 350 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 IFI16Q16666 785 aaKnown RBP9.01□□□□□ -0.97
VPS13B-206ENST00000496144 GPR158Q5T848 1215 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 INTS8Q75QN2 995 aaKnown RBP9.01□□□□□ -0.97
VPS13B-206ENST00000496144 FAM213AQ9BRX8 229 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 PDZD7Q9H5P4 517 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 ADAMTS1Q9UHI8 967 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 SLC12A6Q9UHW9 1150 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 ITGA11Q9UKX5 1188 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 PCDHB9Q9Y5E1 797 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 H3BQF6 201 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 ZNF862O60290 1169 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 STBD1O95210 358 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 CCDC70Q6NSX1 233 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 LRRC57Q8N9N7 239 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 RNF34Q969K3 372 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 CWH43Q9H720 699 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 WNT16Q9UBV4 365 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 HES2Q9Y543 173 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 BACE2Q9Y5Z0 518 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 A0A1B0GUA9 196 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 FSCN2O14926 492 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 PMM2O15305 246 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 NDUFS2O75306 463 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 NFATC1O95644 943 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 SRFP11831 508 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 AVPR2P30518 371 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 VAMP7P51809 220 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 ADCY1Q08828 1119 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 CASP8Q14790 479 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 CCDC181Q5TID7 509 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 ADGRD2Q7Z7M1 963 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 SPATA4Q8NEY3 305 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 SPPL2BQ8TCT7 592 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 AENQ8WTP8 325 aaKnown RBP9.01□□□□□ -0.97
VPS13B-206ENST00000496144 RNF139Q8WU17 664 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 ING5Q8WYH8 240 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 ACO2Q99798 780 aaKnown RBP9.01□□□□□ -0.97
VPS13B-206ENST00000496144 EVA1BQ9NVM1 165 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 NAGPAQ9UK23 515 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 RTN3O95197 1032 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-206ENST00000496144 HOXC8P31273 242 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 STARD3Q14849 445 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 TARBP2Q15633 366 aaKnown RBP9.01□□□□□ -0.97
VPS13B-206ENST00000496144 MLF2Q15773 248 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-206ENST00000496144 WDR6Q9NNW5 1121 aaKnown RBP9.01□□□□□ -0.97
VPS13B-206ENST00000496144 ANKRD62A6NC57 917 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 LRRIQ3A6PVS8 624 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-206ENST00000496144 C2CD4DB7Z1M9 353 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 TEX28O15482 410 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 MGEA5O60502 916 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 FTCDO95954 541 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 CNPP09543 421 aaKnown RBP9.01□□□□□ -0.97
VPS13B-206ENST00000496144 TRIM49P0CI25 452 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 TRIM49CP0CI26 452 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 CXCR5P32302 372 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 PPM1FP49593 454 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-206ENST00000496144 DRAP1Q14919 205 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-206ENST00000496144 GLE1Q53GS7 698 aaKnown RBP9.01□□□□□ -0.97
VPS13B-206ENST00000496144 C1orf220Q5T0J3 134 aa9.01□□□□□ -0.97
VPS13B-206ENST00000496144 DDX1Q92499 740 aaKnown RBP9.01□□□□□ -0.97
VPS13B-206ENST00000496144 DDX3XO00571 662 aaKnown RBP eCLIP9□□□□□ -0.97
VPS13B-206ENST00000496144 CFAP221Q4G0U5 840 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 VPS36Q86VN1 386 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 DTWD2Q8NBA8 298 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 PDZD8Q8NEN9 1154 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 TPCN2Q8NHX9 752 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 MS4A14Q96JA4 679 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 TRIM62Q9BVG3 475 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 PCIF1Q9H4Z3 704 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 HPCAL4Q9UM19 191 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 HIDE1A8MVS5 230 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 TISP43B9A030 160 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 EXTL3O43909 919 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 MBL2P11226 248 aaPredicted RBP9□□□□□ -0.97
VPS13B-206ENST00000496144 CCNI2Q6ZMN8 369 aaPredicted RBP9□□□□□ -0.97
VPS13B-206ENST00000496144 KXD1Q9BQD3 176 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 SMARCAL1Q9NZC9 954 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 ENPEPQ07075 957 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 PDGFRLQ15198 375 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 SLC39A12Q504Y0 691 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 RNF219Q5W0B1 726 aaPredicted RBP9□□□□□ -0.97
VPS13B-206ENST00000496144 MAP4K3Q8IVH8 894 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms