RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 C8orf48Q96LL4 319 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 C2orf42Q9NWW7 574 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 DUS2Q9NX74 493 aaKnown RBP18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 EHD2Q9NZN4 543 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 TRPM5Q9NZQ8 1165 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 GMEB2Q9UKD1 530 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 HPSEQ9Y251 543 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 ZNF292O60281 2723 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 F8VP50 259 aa18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 TRDMT1O14717 391 aaKnown RBP18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 MYL1P05976 194 aa18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 PDE6CP51160 858 aa18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 LPAL2Q16609 132 aa18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 ZNF699Q32M78 642 aa18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 FSTL4Q6MZW2 842 aa18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 LONP2Q86WA8 852 aa18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 SLC9A9Q8IVB4 645 aa18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 GPR161Q8N6U8 529 aaKnown RBP18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 SH3RF2Q8TEC5 729 aa18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 TTLL2Q9BWV7 592 aa18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 ELOVL4Q9GZR5 314 aa18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 KCTD10Q9H3F6 313 aa18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 DMAC2Q9NW81 257 aa18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 ZDHHC9Q9Y397 364 aa18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 WNT6Q9Y6F9 365 aa18.06■□□□□ 0.48
APOBEC3A-204ENST00000495988 PDXKO00764 312 aa18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 C4BPAP04003 597 aaKnown RBP18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 GJA4P35212 333 aa18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 NOP14P78316 857 aaKnown RBP18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 CLDN10P78369 228 aa18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 NCOA4Q13772 614 aa18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 SIM2Q14190 667 aaPredicted RBP18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 ZNF667Q5HYK9 610 aa18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 B3GALNT2Q8NCR0 500 aa18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 ATP2A3Q93084 1043 aa18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 EXOC4Q96A65 974 aa18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 P2RY13Q9BPV8 354 aa18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 ZNF518BQ9C0D4 1074 aa18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 SMYD3Q9H7B4 428 aa18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 ECT2Q9H8V3 914 aa18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 VRTNQ9H8Y1 702 aa18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 ARHGAP26Q9UNA1 814 aa18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 HELZP42694 1942 aaKnown RBP18.05■□□□□ 0.48
APOBEC3A-204ENST00000495988 CLDN5O00501 218 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 HRO43593 1189 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 ATG13O75143 517 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 EGFP01133 1207 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 NR3C1P04150 777 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 RPN1P04843 607 aaKnown RBP18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 TCF3P15923 654 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 PFKLP17858 780 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 CNR2P34972 360 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 SYKP43405 635 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 RAP1GAPP47736 663 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 PPP3CCP48454 512 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 GALK1P51570 392 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 CACNA2D1P54289 1103 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 CDH8P55286 799 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 DLG4P78352 724 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 IFRD2Q12894 506 aaPredicted RBP18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 SRSF5Q13243 272 aaKnown RBP18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 EML3Q32P44 896 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 LAIR1Q6GTX8 287 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 PKN3Q6P5Z2 889 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 SCARA5Q6ZMJ2 495 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 TMEM174Q8WUU8 243 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 ELMO3Q96BJ8 720 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 B3GNT5Q9BYG0 378 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 FBRSL1Q9HCM7 1045 aaKnown RBP18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 TMEM30AQ9NV96 361 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 USP18Q9UMW8 372 aa18.04■□□□□ 0.48
APOBEC3A-204ENST00000495988 ZNF840PA6NDX5 716 aa18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 RNF40O75150 1001 aa18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 KIF20AO95235 890 aa18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 VNN1O95497 513 aa18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 ABL1P00519 1130 aa18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 PRR29P0C7W0 189 aa18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 DRD1P21728 446 aa18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 HOXC13P31276 330 aa18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 NDUFA8P51970 172 aa18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 TAF10Q12962 218 aa18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 NR1H3Q13133 447 aa18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 PUM1Q14671 1186 aaKnown RBP eCLIP18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 CEP135Q66GS9 1140 aa18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 NAIF1Q69YI7 327 aaPredicted RBP18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 CD101Q93033 1021 aa18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 CCDC47Q96A33 483 aaKnown RBP18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 SLITRK1Q96PX8 696 aa18.03■□□□□ 0.48
APOBEC3A-204ENST00000495988 ATP8B3O60423 1300 aa18.02■□□□□ 0.48
APOBEC3A-204ENST00000495988 FAM237AA0A1B0GTK4 181 aa18.02■□□□□ 0.48
APOBEC3A-204ENST00000495988 CALUO43852 315 aaPredicted RBP18.02■□□□□ 0.48
APOBEC3A-204ENST00000495988 HOXA6P31267 233 aa18.02■□□□□ 0.48
APOBEC3A-204ENST00000495988 RSPO4Q2I0M5 234 aaPredicted RBP18.02■□□□□ 0.48
APOBEC3A-204ENST00000495988 SGSM1Q2NKQ1 1148 aa18.02■□□□□ 0.48
APOBEC3A-204ENST00000495988 DGLUCYQ7Z3D6 616 aa18.02■□□□□ 0.48
APOBEC3A-204ENST00000495988 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.02■□□□□ 0.48
APOBEC3A-204ENST00000495988 WDR5BQ86VZ2 330 aa18.02■□□□□ 0.48
APOBEC3A-204ENST00000495988 TMC2Q8TDI7 906 aa18.02■□□□□ 0.48
APOBEC3A-204ENST00000495988 TNIP3Q96KP6 325 aa18.02■□□□□ 0.48
APOBEC3A-204ENST00000495988 MED10Q9BTT4 135 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms