RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 CYP27A1Q02318 531 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 ZNF252P-AS1Q0IIN9 211 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 FOXC1Q12948 553 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 MYO1EQ12965 1108 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 GAB4Q2WGN9 574 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 SH3PXD2AQ5TCZ1 1133 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 CYP2U1Q7Z449 544 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 C11orf74Q86VG3 221 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 RASSF3Q86WH2 238 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 CCDC33Q8N5R6 958 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 KBTBD7Q8WVZ9 684 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 HPDLQ96IR7 371 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 ANKRD36BP1Q96IX9 119 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 SPATA17Q96L03 361 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 CLIC6Q96NY7 704 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 CRTAC1Q9NQ79 661 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 OLFML3Q9NRN5 406 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 TRPM5Q9NZQ8 1165 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 FBXO2Q9UK22 296 aaPredicted RBP13.19□□□□□ -0.3
SAMM50-205ENST00000493621 CDH9Q9ULB4 789 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 MMP17Q9ULZ9 603 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 PTPRJQ12913 1337 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 CEP192Q8TEP8 1941 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 VPS37CA5D8V6 355 aaPredicted RBP13.18□□□□□ -0.3
SAMM50-205ENST00000493621 C1QTNF9BB2RNN3 333 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 PATE3B3GLJ2 98 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 PRPF6O94906 941 aaKnown RBP13.18□□□□□ -0.3
SAMM50-205ENST00000493621 TNNC2P02585 160 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 CYP17A1P05093 508 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 PDGFRBP09619 1106 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 C1QTNF9P0C862 333 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 ANXA13P27216 316 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 TXLNAP40222 546 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 DHPSP49366 369 aaPredicted RBP13.18□□□□□ -0.3
SAMM50-205ENST00000493621 ALCAMQ13740 583 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 VSTM1Q6UX27 236 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 DENND5BQ6ZUT9 1274 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 DPH6Q7L8W6 267 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 FILIP1Q7Z7B0 1213 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 GPD1LQ8N335 351 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 MDGA1Q8NFP4 955 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 OR5B17Q8NGF7 314 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 CNOT6LQ96LI5 555 aaKnown RBP13.18□□□□□ -0.3
SAMM50-205ENST00000493621 TMEM9BQ9NQ34 198 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 PANK4Q9NVE7 773 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 INTS13Q9NVM9 706 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 CIZ1Q9ULV3 898 aaPredicted RBP13.18□□□□□ -0.3
SAMM50-205ENST00000493621 SRPRBQ9Y5M8 271 aaKnown RBP13.18□□□□□ -0.3
SAMM50-205ENST00000493621 PI4KAP42356 2102 aa13.18□□□□□ -0.3
SAMM50-205ENST00000493621 PLXND1Q9Y4D7 1925 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 SCAMP3O14828 347 aaKnown RBP13.17□□□□□ -0.3
SAMM50-205ENST00000493621 ABL1P00519 1130 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 PFKLP17858 780 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 SPINK2P20155 84 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 STAT6P42226 847 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 MAPRE1Q15691 268 aaKnown RBP13.17□□□□□ -0.3
SAMM50-205ENST00000493621 CRY1Q16526 586 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 UNQ6494/PRO21346Q6UXR6 183 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 TMEM92Q6UXU6 159 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 LIMS2Q7Z4I7 341 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 SFTPA1Q8IWL2 248 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 ALLCQ8N6M5 410 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 PIGKQ92643 395 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 MMS19Q96T76 1030 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 PANK2Q9BZ23 570 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 RNF38Q9H0F5 515 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 SMPD4Q9NXE4 827 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 CPQQ9Y646 472 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 AKAP13Q12802 2813 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 ASCC3Q8N3C0 2202 aaKnown RBP13.17□□□□□ -0.3
SAMM50-205ENST00000493621 MYO18AQ92614 2054 aaKnown RBP13.17□□□□□ -0.3
SAMM50-205ENST00000493621 ADAMTS9Q9P2N4 1935 aa13.17□□□□□ -0.3
SAMM50-205ENST00000493621 FRMD3A2A2Y4 597 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 ZNF840PA6NDX5 716 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 ZNF233A6NK53 670 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 CDX4O14627 284 aaPredicted RBP13.16□□□□□ -0.3
SAMM50-205ENST00000493621 TRIM66O15016 1216 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 ALDH1A2O94788 518 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 KLF8O95600 359 aaPredicted RBP13.16□□□□□ -0.3
SAMM50-205ENST00000493621 HNRNPLP14866 589 aaKnown RBP eCLIP13.16□□□□□ -0.3
SAMM50-205ENST00000493621 WARSP23381 471 aaKnown RBP13.16□□□□□ -0.3
SAMM50-205ENST00000493621 TIE1P35590 1138 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 SLC6A11P48066 632 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 IRX4P78413 519 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 SLC7A9P82251 487 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 MRPS21P82921 87 aaKnown RBP13.16□□□□□ -0.3
SAMM50-205ENST00000493621 CEBPZQ03701 1054 aaKnown RBP13.16□□□□□ -0.3
SAMM50-205ENST00000493621 DHCR24Q15392 516 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 DUOXA2Q1HG44 320 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 UAP1L1Q3KQV9 507 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 MDH1BQ5I0G3 518 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 CCDC73Q6ZRK6 1079 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 HS2ST1Q7LGA3 356 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 CBWD2Q8IUF1 395 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 ADGRG2Q8IZP9 1017 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 TXNDC5Q8NBS9 432 aaKnown RBP13.16□□□□□ -0.3
SAMM50-205ENST00000493621 MYCBPAPQ8TBZ2 947 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 RLN3Q8WXF3 142 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 PCED1BQ96HM7 432 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 CEP295NLQ96MC4 621 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms