RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 WDR49Q8IV35 697 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 ADGRF2Q8IZF7 708 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 ALDH1A2O94788 518 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 TFRCP02786 760 aaKnown RBP16.9■□□□□ 0.3
BRAT1-206ENST00000493232 LHX1P48742 406 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 PCYT1AP49585 367 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 SERPINB8P50452 374 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 MCL1Q07820 350 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 SLC29A2Q14542 456 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 TRIM69Q86WT6 500 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 TRIM48Q8IWZ4 208 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 ACER1Q8TDN7 264 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 CYGBQ8WWM9 190 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 ZFP42Q96MM3 310 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 TMX2Q9Y320 296 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 RPS6KL1Q9Y6S9 549 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 FOXN3O00409 490 aaPredicted RBP16.9■□□□□ 0.3
BRAT1-206ENST00000493232 RUNX1T1Q06455 604 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 HES6Q96HZ4 224 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 ZC4H2Q9NQZ6 224 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 SPASTQ9UBP0 616 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 SLC25A13Q9UJS0 675 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 APPL1Q9UKG1 709 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 IQSEC2Q5JU85 1478 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 WDR47O94967 919 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 SGPL1O95470 568 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 ALOX15P16050 662 aaPredicted RBP16.9■□□□□ 0.3
BRAT1-206ENST00000493232 CCND1P24385 295 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 TRPC1P48995 793 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 OXCT1P55809 520 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 TFDP3Q5H9I0 405 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 GLRA4Q5JXX5 417 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 SLFN11Q7Z7L1 901 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 ARRDC4Q8NCT1 418 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 C3orf20Q8ND61 904 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 BLOC1S5Q8TDH9 187 aa16.9■□□□□ 0.3
BRAT1-206ENST00000493232 STN1Q9H668 368 aaKnown RBP16.9■□□□□ 0.3
BRAT1-206ENST00000493232 DRG1Q9Y295 367 aaKnown RBP16.9■□□□□ 0.3
BRAT1-206ENST00000493232 SDR42E2A6NKP2 422 aa16.89■□□□□ 0.3
BRAT1-206ENST00000493232 MAPK1P28482 360 aa16.89■□□□□ 0.3
BRAT1-206ENST00000493232 NCKAP1LP55160 1127 aa16.89■□□□□ 0.3
BRAT1-206ENST00000493232 TRIP10Q15642 601 aa16.89■□□□□ 0.3
BRAT1-206ENST00000493232 CLEC16AQ2KHT3 1053 aa16.89■□□□□ 0.3
BRAT1-206ENST00000493232 DENND1BQ6P3S1 775 aa16.89■□□□□ 0.3
BRAT1-206ENST00000493232 C4orf19Q8IY42 314 aa16.89■□□□□ 0.3
BRAT1-206ENST00000493232 ARMC2Q8NEN0 867 aa16.89■□□□□ 0.3
BRAT1-206ENST00000493232 SPACA6W5XKT8 324 aa16.89■□□□□ 0.3
BRAT1-206ENST00000493232 DAB1O75553 588 aa16.89■□□□□ 0.29
BRAT1-206ENST00000493232 MBL2P11226 248 aaPredicted RBP16.89■□□□□ 0.29
BRAT1-206ENST00000493232 CYP11B1P15538 503 aa16.89■□□□□ 0.29
BRAT1-206ENST00000493232 CAPZA2P47755 286 aa16.89■□□□□ 0.29
BRAT1-206ENST00000493232 CLCN3P51790 818 aa16.89■□□□□ 0.29
BRAT1-206ENST00000493232 ACOT1Q86TX2 421 aa16.89■□□□□ 0.29
BRAT1-206ENST00000493232 CDR2LQ86X02 465 aaPredicted RBP16.89■□□□□ 0.29
BRAT1-206ENST00000493232 L3MBTL3Q96JM7 780 aaPredicted RBP16.89■□□□□ 0.29
BRAT1-206ENST00000493232 CAMSAP1Q5T5Y3 1602 aa16.89■□□□□ 0.29
BRAT1-206ENST00000493232 E2F8A0AVK6 867 aa16.89■□□□□ 0.29
BRAT1-206ENST00000493232 PTPAQ15257 358 aa16.89■□□□□ 0.29
BRAT1-206ENST00000493232 DDX42Q86XP3 938 aaKnown RBP eCLIP16.89■□□□□ 0.29
BRAT1-206ENST00000493232 PRMT6Q96LA8 375 aaPredicted RBP16.89■□□□□ 0.29
BRAT1-206ENST00000493232 LRRC40Q9H9A6 602 aa16.89■□□□□ 0.29
BRAT1-206ENST00000493232 TRPM5Q9NZQ8 1165 aa16.89■□□□□ 0.29
BRAT1-206ENST00000493232 VCAM1P19320 739 aa16.89■□□□□ 0.29
BRAT1-206ENST00000493232 KPNA1P52294 538 aaPredicted RBP16.89■□□□□ 0.29
BRAT1-206ENST00000493232 GIT2Q14161 759 aa16.89■□□□□ 0.29
BRAT1-206ENST00000493232 UBXN6Q9BZV1 441 aa16.89■□□□□ 0.29
BRAT1-206ENST00000493232 C6orf203Q9P0P8 240 aaPredicted RBP16.89■□□□□ 0.29
BRAT1-206ENST00000493232 WHRNQ9P202 907 aa16.89■□□□□ 0.29
BRAT1-206ENST00000493232 ZNF229Q9UJW7 825 aa16.89■□□□□ 0.29
BRAT1-206ENST00000493232 PSMA3P25788 255 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 DENND5BQ6ZUT9 1274 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 TXNRD3Q86VQ6 643 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 PABPC3Q9H361 631 aaKnown RBP16.88■□□□□ 0.29
BRAT1-206ENST00000493232 UBE2Q2LH0YL09 131 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 C2CD2LO14523 706 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 COPAP53621 1224 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 ELAVL2Q12926 359 aaKnown RBP16.88■□□□□ 0.29
BRAT1-206ENST00000493232 DEPDC1Q5TB30 811 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 P3H2Q8IVL5 708 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 CNPY3Q9BT09 278 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 CCT8L1PA6NM43 557 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 URODP06132 367 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 ARP10275 920 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 CNTN1Q12860 1018 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 PLEKHM3Q6ZWE6 761 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 HNRNPLLQ8WVV9 542 aaKnown RBP16.88■□□□□ 0.29
BRAT1-206ENST00000493232 ECSITQ9BQ95 431 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 GPRC5CQ9NQ84 441 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 RNF112Q9ULX5 631 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 CNTFP26441 200 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 HSPA13P48723 471 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 KLC1Q07866 573 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 DNERQ8NFT8 737 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 RIN2Q8WYP3 895 aaPredicted RBP16.88■□□□□ 0.29
BRAT1-206ENST00000493232 FRMPD1Q5SYB0 1578 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 PRLRP16471 622 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 VCLP18206 1134 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 ITGALP20701 1170 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 CTXN3Q4LDR2 81 aa16.88■□□□□ 0.29
BRAT1-206ENST00000493232 INTS5Q6P9B9 1019 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms