RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 ZNF77Q15935 545 aa18.4■□□□□ 0.54
SGMS1-204ENST00000492601 NAIF1Q69YI7 327 aaPredicted RBP18.4■□□□□ 0.54
SGMS1-204ENST00000492601 FSTL4Q6MZW2 842 aa18.4■□□□□ 0.54
SGMS1-204ENST00000492601 PRR23BQ6ZRT6 265 aa18.4■□□□□ 0.54
SGMS1-204ENST00000492601 PARD3BQ8TEW8 1205 aa18.4■□□□□ 0.54
SGMS1-204ENST00000492601 SYAP1Q96A49 352 aaPredicted RBP18.4■□□□□ 0.54
SGMS1-204ENST00000492601 SMYD3Q9H7B4 428 aa18.4■□□□□ 0.54
SGMS1-204ENST00000492601 DUS2Q9NX74 493 aaKnown RBP18.4■□□□□ 0.54
SGMS1-204ENST00000492601 WNT6Q9Y6F9 365 aa18.4■□□□□ 0.54
SGMS1-204ENST00000492601 CLDN5O00501 218 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 TRIM66O15016 1216 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 STAU1O95793 577 aaKnown RBP18.39■□□□□ 0.53
SGMS1-204ENST00000492601 HDCP19113 662 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 ATICP31939 592 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 RAP1GAPP47736 663 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 CDH8P55286 799 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 GRSF1Q12849 480 aaKnown RBP eCLIP18.39■□□□□ 0.53
SGMS1-204ENST00000492601 IFRD2Q12894 506 aaPredicted RBP18.39■□□□□ 0.53
SGMS1-204ENST00000492601 USP4Q13107 963 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 SRSF5Q13243 272 aaKnown RBP18.39■□□□□ 0.53
SGMS1-204ENST00000492601 ZNF699Q32M78 642 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 TMEM196Q5HYL7 178 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 PKN3Q6P5Z2 889 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 SCARA5Q6ZMJ2 495 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 SYNPOQ8N3V7 929 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 B3GALNT2Q8NCR0 500 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 SH3RF2Q8TEC5 729 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 OSCP1Q8WVF1 389 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 SECISBP2LQ93073 1101 aaKnown RBP18.39■□□□□ 0.53
SGMS1-204ENST00000492601 ZNF518BQ9C0D4 1074 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 KCTD10Q9H3F6 313 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 TMEM30AQ9NV96 361 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 DMAC2Q9NW81 257 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 TRPM5Q9NZQ8 1165 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 USP25Q9UHP3 1055 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 RAB23Q9ULC3 237 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 HPSEQ9Y251 543 aa18.39■□□□□ 0.53
SGMS1-204ENST00000492601 MYO18AQ92614 2054 aaKnown RBP18.38■□□□□ 0.53
SGMS1-204ENST00000492601 TRDMT1O14717 391 aaKnown RBP18.38■□□□□ 0.53
SGMS1-204ENST00000492601 PAPSS2O95340 614 aaPredicted RBP18.38■□□□□ 0.53
SGMS1-204ENST00000492601 ABL1P00519 1130 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 EGFP01133 1207 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 C4BPAP04003 597 aaKnown RBP18.38■□□□□ 0.53
SGMS1-204ENST00000492601 NR3C1P04150 777 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 RPN1P04843 607 aaKnown RBP18.38■□□□□ 0.53
SGMS1-204ENST00000492601 FAM163BP0C2L3 166 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 GJA4P35212 333 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 SYKP43405 635 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 IFNAR2P48551 515 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 NDUFA8P51970 172 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 DLG4P78352 724 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 NCOA4Q13772 614 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 ZNF667Q5HYK9 610 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 CPA6Q8N4T0 437 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 C8orf48Q96LL4 319 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 CEP295NLQ96MC4 621 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 B3GNT5Q9BYG0 378 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 ECT2Q9H8V3 914 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 FBRSL1Q9HCM7 1045 aaKnown RBP18.38■□□□□ 0.53
SGMS1-204ENST00000492601 GMEB2Q9UKD1 530 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 GTF3C3Q9Y5Q9 886 aa18.38■□□□□ 0.53
SGMS1-204ENST00000492601 PDXKO00764 312 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 HRO43593 1189 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 VNN1O95497 513 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 PRR29P0C7W0 189 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 GALK1P51570 392 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 AP3M2P53677 418 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 AMPD2Q01433 879 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 TAF10Q12962 218 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 SIM2Q14190 667 aaPredicted RBP18.37■□□□□ 0.53
SGMS1-204ENST00000492601 EML3Q32P44 896 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 CEP135Q66GS9 1140 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 LONP2Q86WA8 852 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 SLC9A9Q8IVB4 645 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 ATP2A3Q93084 1043 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 P2RY13Q9BPV8 354 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 TTLL2Q9BWV7 592 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 ELOVL4Q9GZR5 314 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 LINC00597Q9H2U6 94 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 USP18Q9UMW8 372 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 ARHGAP26Q9UNA1 814 aa18.37■□□□□ 0.53
SGMS1-204ENST00000492601 ZNF840PA6NDX5 716 aa18.36■□□□□ 0.53
SGMS1-204ENST00000492601 MYL1P05976 194 aa18.36■□□□□ 0.53
SGMS1-204ENST00000492601 NOP14P78316 857 aaKnown RBP18.36■□□□□ 0.53
SGMS1-204ENST00000492601 CLDN10P78369 228 aa18.36■□□□□ 0.53
SGMS1-204ENST00000492601 ZXDBP98169 803 aa18.36■□□□□ 0.53
SGMS1-204ENST00000492601 ERMP1Q7Z2K6 904 aa18.36■□□□□ 0.53
SGMS1-204ENST00000492601 MED10Q9BTT4 135 aa18.36■□□□□ 0.53
SGMS1-204ENST00000492601 SDCBP2Q9H190 292 aa18.36■□□□□ 0.53
SGMS1-204ENST00000492601 VRTNQ9H8Y1 702 aa18.36■□□□□ 0.53
SGMS1-204ENST00000492601 POLR3BQ9NW08 1133 aaPredicted RBP18.36■□□□□ 0.53
SGMS1-204ENST00000492601 EHD2Q9NZN4 543 aa18.36■□□□□ 0.53
SGMS1-204ENST00000492601 LEFTY2O00292 366 aa18.35■□□□□ 0.53
SGMS1-204ENST00000492601 RNF40O75150 1001 aa18.35■□□□□ 0.53
SGMS1-204ENST00000492601 PXNP49023 591 aaPredicted RBP18.35■□□□□ 0.53
SGMS1-204ENST00000492601 PDE6CP51160 858 aa18.35■□□□□ 0.53
SGMS1-204ENST00000492601 FOXK2Q01167 660 aa18.35■□□□□ 0.53
SGMS1-204ENST00000492601 ORC1Q13415 861 aa18.35■□□□□ 0.53
SGMS1-204ENST00000492601 RSPO4Q2I0M5 234 aaPredicted RBP18.35■□□□□ 0.53
SGMS1-204ENST00000492601 LAIR1Q6GTX8 287 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms