RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 PPM1LQ5SGD2 360 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 ATAT1Q5SQI0 421 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 CREG2Q8IUH2 290 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 GSPT2Q8IYD1 628 aaKnown RBP9.99□□□□□ -0.81
BRCA1-219ENST00000491747 GJD3Q8N144 294 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 TTC9BQ8N6N2 239 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 SMG7Q92540 1137 aaKnown RBP9.99□□□□□ -0.81
BRCA1-219ENST00000491747 RIPOR3Q96MK2 946 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 ZCWPW1Q9H0M4 648 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 DPP7Q9UHL4 492 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 NME7Q9Y5B8 376 aa9.99□□□□□ -0.81
BRCA1-219ENST00000491747 A0A087WUV0 522 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-219ENST00000491747 OR6C75A6NL08 312 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 LRRN2O75325 713 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 HNRNPH3P31942 346 aaKnown RBP9.98□□□□□ -0.81
BRCA1-219ENST00000491747 GPR17Q13304 367 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 CCDC142Q17RM4 750 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 ZACNQ401N2 412 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 LIN9Q5TKA1 542 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 ICE2Q659A1 982 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 TPGS2Q68CL5 300 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 EMBQ6PCB8 327 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 SND1Q7KZF4 910 aaKnown RBP eCLIP9.98□□□□□ -0.81
BRCA1-219ENST00000491747 SV2AQ7L0J3 742 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 TADA2BQ86TJ2 420 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 PACS2Q86VP3 889 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 TCEAL8Q8IYN2 117 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 KBTBD7Q8WVZ9 684 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 RUFY1Q96T51 708 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 DEF6Q9H4E7 631 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 CYP4F11Q9HBI6 524 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 TMLHEQ9NVH6 421 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 HCFC1R1Q9NWW0 138 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 AFF4Q9UHB7 1163 aaKnown RBP9.98□□□□□ -0.81
BRCA1-219ENST00000491747 DSEQ9UL01 958 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 POLIQ9UNA4 740 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 DUSP10Q9Y6W6 482 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 DOCK8Q8NF50 2099 aa9.98□□□□□ -0.81
BRCA1-219ENST00000491747 ARHGEF37A1IGU5 675 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 MTMR11A4FU01 709 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 TNFRSF10AO00220 468 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 GABRDO14764 452 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 HUS1O60921 280 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 CPP00450 1065 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 ACAT1P24752 427 aaKnown RBP9.97□□□□□ -0.81
BRCA1-219ENST00000491747 IRAK1P51617 712 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 MYO1EQ12965 1108 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 CCDC181Q5TID7 509 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 GRASPQ7Z6J2 395 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-219ENST00000491747 METTL23Q86XA0 190 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 TOP6BLQ8N6T0 577 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 ATAD1Q8NBU5 361 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 SPATA4Q8NEY3 305 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 NECTIN4Q96NY8 510 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 CAPS2Q9BXY5 557 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 RHOBTB2Q9BYZ6 727 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 WDR6Q9NNW5 1121 aaKnown RBP9.97□□□□□ -0.81
BRCA1-219ENST00000491747 DDX43Q9NXZ2 648 aaKnown RBP9.97□□□□□ -0.81
BRCA1-219ENST00000491747 SLC27A5Q9Y2P5 690 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 HYOU1Q9Y4L1 999 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 PTPRDP23468 1912 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 C2CD4DB7Z1M9 353 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 NRG2O14511 850 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-219ENST00000491747 CETN3O15182 167 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 SOAT2O75908 522 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 HNRNPA1P09651 372 aaKnown RBP eCLIP9.97□□□□□ -0.81
BRCA1-219ENST00000491747 LMO2P25791 158 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 HOXA9P31269 272 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 SSTR3P32745 418 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-219ENST00000491747 PAFAH1B1P43034 410 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 GCLMP48507 274 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 KLK7P49862 253 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 FKBP3Q00688 224 aaKnown RBP9.97□□□□□ -0.81
BRCA1-219ENST00000491747 LRRC63Q05C16 580 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 DUSP4Q13115 394 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 BIRC3Q13489 604 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 NCOA4Q13772 614 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 WDR72Q3MJ13 1102 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 SLC39A12Q504Y0 691 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 MIIPQ5JXC2 388 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 ALS2CLQ60I27 953 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 INTS8Q75QN2 995 aaKnown RBP9.97□□□□□ -0.81
BRCA1-219ENST00000491747 ADGRF2Q8IZF7 708 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 PKMYT1Q99640 499 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 TSG101Q99816 390 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 MRPL45Q9BRJ2 306 aaKnown RBP9.97□□□□□ -0.81
BRCA1-219ENST00000491747 MKNK1Q9BUB5 465 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 OXCT2Q9BYC2 517 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-219ENST00000491747 MMRN2Q9H8L6 949 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 PIDD1Q9HB75 910 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 DNMT3BQ9UBC3 853 aaKnown RBP9.97□□□□□ -0.81
BRCA1-219ENST00000491747 PCDHA13Q9Y5I0 950 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 INSL5Q9Y5Q6 135 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 CAPN6Q9Y6Q1 641 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 BDP1A6H8Y1 2624 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 MYO10Q9HD67 2058 aa9.97□□□□□ -0.81
BRCA1-219ENST00000491747 PRRG1O14668 218 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 ATP2C2O75185 946 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 STAU1O95793 577 aaKnown RBP9.96□□□□□ -0.81
BRCA1-219ENST00000491747 ELF1P32519 619 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms