RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 HEATR3Q7Z4Q2 680 aa5.61□□□□□ -1.51
CTNNB1-215ENST00000488914 C1QL2Q7Z5L3 287 aa5.61□□□□□ -1.51
CTNNB1-215ENST00000488914 C14orf80Q86SX3 495 aa5.61□□□□□ -1.51
CTNNB1-215ENST00000488914 USP37Q86T82 979 aa5.61□□□□□ -1.51
CTNNB1-215ENST00000488914 FAM109AQ8N4B1 249 aa5.61□□□□□ -1.51
CTNNB1-215ENST00000488914 SCARB1Q8WTV0 552 aa5.61□□□□□ -1.51
CTNNB1-215ENST00000488914 PAIP2Q9BPZ3 127 aaKnown RBP5.61□□□□□ -1.51
CTNNB1-215ENST00000488914 CNPPD1Q9BV87 410 aa5.61□□□□□ -1.51
CTNNB1-215ENST00000488914 RANBP17Q9H2T7 1088 aaKnown RBP5.61□□□□□ -1.51
CTNNB1-215ENST00000488914 MRPL46Q9H2W6 279 aaKnown RBP5.61□□□□□ -1.51
CTNNB1-215ENST00000488914 TSPY26PQ9H489 355 aa5.61□□□□□ -1.51
CTNNB1-215ENST00000488914 RIC8AQ9NPQ8 531 aa5.61□□□□□ -1.51
CTNNB1-215ENST00000488914 RBM28Q9NW13 759 aaKnown RBP5.61□□□□□ -1.51
CTNNB1-215ENST00000488914 PRDM4Q9UKN5 801 aa5.61□□□□□ -1.51
CTNNB1-215ENST00000488914 PADI4Q9UM07 663 aa5.61□□□□□ -1.51
CTNNB1-215ENST00000488914 FAM170AA1A519 330 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 PPM1DO15297 605 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 TPM2P07951 284 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 NHLRC4P0CG21 123 aaPredicted RBP5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 CCND1P24385 295 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 DDIT3P35638 169 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 PPM1FP49593 454 aaPredicted RBP5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 ZNF131P52739 623 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 ZNF132P52740 706 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 HK3P52790 923 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 HMGN5P82970 282 aaKnown RBP5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 PUM3Q15397 648 aaKnown RBP5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 MIER2Q8N344 545 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 PRR18Q8N4B5 295 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 ANKRD42Q8N9B4 389 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 TTC8Q8TAM2 541 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 KLHDC4Q8TBB5 520 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 FAM136AQ96C01 138 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 CCDC34Q96HJ3 373 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 MPP4Q96JB8 637 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 C1QTNF7Q9BXJ2 289 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.6□□□□□ -1.517e-7■■■□□ 17.9
CTNNB1-215ENST00000488914 SERTAD4Q9NUC0 356 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 EHD3Q9NZN3 535 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 MAFFQ9ULX9 164 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 PCDHA1Q9Y5I3 950 aa5.6□□□□□ -1.51
CTNNB1-215ENST00000488914 GCOM1H8Y6P7 765 aaPredicted RBP5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 M0QYG6 137 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 CHEK2O96017 543 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 ERBB2P04626 1255 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 ITGALP20701 1170 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 CD6P30203 668 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 GCLCP48506 637 aaPredicted RBP5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 MAP2K6P52564 334 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 ZNF134P52741 427 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 ZBED6P86452 979 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 PDE1CQ14123 709 aaPredicted RBP5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 EPHA10Q5JZY3 1008 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 SPECC1Q5M775 1068 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 CCDC158Q5M9N0 1113 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 WDR45BQ5MNZ6 344 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 ARMC3Q5W041 872 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 ARL6IP6Q8N6S5 226 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 SMG7Q92540 1137 aaKnown RBP5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 RGMAQ96B86 450 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 IWS1Q96ST2 819 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 ALG8Q9BVK2 526 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 ZNF70Q9UC06 446 aaPredicted RBP5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 POLHQ9Y253 713 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 RAD54BQ9Y620 910 aa5.59□□□□□ -1.51
CTNNB1-215ENST00000488914 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 IPO5O00410 1097 aaKnown RBP5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 PES1O00541 588 aaKnown RBP5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 IPO8O15397 1037 aaKnown RBP5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 FTLP02792 175 aaPredicted RBP5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 RPL17P18621 184 aaKnown RBP5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 CD151P48509 253 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 NUCB1Q02818 461 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 MCL1Q07820 350 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 BMPR2Q13873 1038 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 SRSF7Q16629 238 aaKnown RBP eCLIP5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 TMEM108Q6UXF1 575 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 MMS22LQ6ZRQ5 1243 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 MAVSQ7Z434 540 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 ZNF354CQ86Y25 554 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 BRSK2Q8IWQ3 736 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 VGLL2Q8N8G2 317 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 ENAHQ8N8S7 591 aaPredicted RBP5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 FAM46DQ8NEK8 389 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 SEMA6DQ8NFY4 1073 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 FAM210AQ96ND0 272 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 HERPUD2Q9BSE4 406 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 IP6K2Q9UHH9 426 aa5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.58□□□□□ -1.52
CTNNB1-215ENST00000488914 GTPBP10A4D1E9 387 aaKnown RBP5.57□□□□□ -1.52
CTNNB1-215ENST00000488914 LINC01548A6NM66 108 aa5.57□□□□□ -1.52
CTNNB1-215ENST00000488914 TARM1B6A8C7 271 aa5.57□□□□□ -1.52
CTNNB1-215ENST00000488914 ZNF213O14771 459 aa5.57□□□□□ -1.52
CTNNB1-215ENST00000488914 DCLK1O15075 740 aa5.57□□□□□ -1.52
CTNNB1-215ENST00000488914 FTH1P19P0C7X4 201 aa5.57□□□□□ -1.52
CTNNB1-215ENST00000488914 TYRP14679 529 aa5.57□□□□□ -1.52
CTNNB1-215ENST00000488914 HOXC13P31276 330 aa5.57□□□□□ -1.52
CTNNB1-215ENST00000488914 LIPAP38571 399 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms