RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 DNM3Q9UQ16 869 aa5.82□□□□□ -1.48
BRCA1-217ENST00000487825 PHIPQ8WWQ0 1821 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 DCHS1Q96JQ0 3298 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 PPFIA2O75334 1257 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 RHOBTB3O94955 611 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 POU3F3P20264 500 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-217ENST00000487825 FPR1P21462 350 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 BMPR1AP36894 532 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 ALDH1A3P47895 512 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 USP14P54578 494 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 MRPS5P82675 430 aaKnown RBP5.81□□□□□ -1.48
BRCA1-217ENST00000487825 RESTQ13127 1097 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 SP140Q13342 867 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 TP53BP2Q13625 1128 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 SEPT2Q15019 361 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 TMEM31Q5JXX7 168 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 AGAP9Q5VTM2 703 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 RNF219Q5W0B1 726 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-217ENST00000487825 Q6YL49 198 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 MCM10Q7L590 875 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 OR56A1Q8NGH5 318 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.81□□□□□ -1.48
BRCA1-217ENST00000487825 ADAM2Q99965 735 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 MOCS1Q9NZB8 636 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 DKK2Q9UBU2 259 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 ATP11BQ9Y2G3 1177 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 ZNF318Q5VUA4 2279 aa5.81□□□□□ -1.48
BRCA1-217ENST00000487825 TRANK1O15050 2925 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 ATP5JP18859 108 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 GUCY1A2P33402 732 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 MTNR1BP49286 362 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 ERVK-21P61565 698 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 SNAPC2Q13487 334 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 DLGAP5Q15398 846 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 GJC2Q5T442 439 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-217ENST00000487825 EGFLAMQ63HQ2 1017 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 ANKRD23Q86SG2 305 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 ERO1BQ86YB8 467 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 RHOT2Q8IXI1 618 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 PPM1NQ8N819 430 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 CCHCR1Q8TD31 782 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 MYOCQ99972 504 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 LBHD1Q9BQE6 289 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-217ENST00000487825 ZSWIM1Q9BR11 485 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 TOR3AQ9H497 397 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 EPHX3Q9H6B9 360 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 PANK3Q9H999 370 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 KLHL11Q9NVR0 708 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 OGDHLQ9ULD0 1010 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 SIK3Q9Y2K2 1263 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 PRKAB1Q9Y478 270 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 GPR45Q9Y5Y3 372 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 ACTL7AQ9Y615 435 aa5.8□□□□□ -1.48
BRCA1-217ENST00000487825 SPTBN4Q9H254 2564 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 AOX1Q06278 1338 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 CACNA1BQ00975 2339 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 CLRN2A0PK11 232 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 ENDOD1O94919 500 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 SPDEFO95238 335 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 NUDT3O95989 172 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 POMCP01189 267 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 CFIP05156 583 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 SLC6A2P23975 617 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 SLC6A9P48067 706 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 EIF4A1P60842 406 aaKnown RBP5.79□□□□□ -1.48
BRCA1-217ENST00000487825 TAP1Q03518 808 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 PPIL2Q13356 520 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 UBXN2BQ14CS0 331 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 SHHQ15465 462 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 TAF7Q15545 349 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-217ENST00000487825 CLUL1Q15846 466 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 LRRC26Q2I0M4 334 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 ZNF529Q6P280 563 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 UBE3BQ7Z3V4 1068 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 MAPKAPK5Q8IW41 473 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 DRC7Q8IY82 874 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 OR2I1PQ8NGU4 316 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 CAVIN3Q969G5 261 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 THUMPD2Q9BTF0 503 aaKnown RBP5.79□□□□□ -1.48
BRCA1-217ENST00000487825 COA1Q9GZY4 146 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 VEZTQ9HBM0 779 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 TMEM140Q9NV12 185 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 ZNHIT2Q9UHR6 403 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 RUVBL1Q9Y265 456 aaKnown RBP5.79□□□□□ -1.48
BRCA1-217ENST00000487825 PCDHAC2Q9Y5I4 1007 aa5.79□□□□□ -1.48
BRCA1-217ENST00000487825 PDHXO00330 501 aa5.78□□□□□ -1.48
BRCA1-217ENST00000487825 PRSS23O95084 383 aa5.78□□□□□ -1.48
BRCA1-217ENST00000487825 LMNAP02545 664 aaKnown RBP5.78□□□□□ -1.48
BRCA1-217ENST00000487825 ELANEP08246 267 aa5.78□□□□□ -1.48
BRCA1-217ENST00000487825 PCSK1P29120 753 aa5.78□□□□□ -1.48
BRCA1-217ENST00000487825 MXRA7P84157 204 aa5.78□□□□□ -1.48
BRCA1-217ENST00000487825 NHLH1Q02575 133 aa5.78□□□□□ -1.48
BRCA1-217ENST00000487825 MGAT2Q10469 447 aa5.78□□□□□ -1.48
BRCA1-217ENST00000487825 KLF1Q13351 362 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-217ENST00000487825 TNFAIP1Q13829 316 aa5.78□□□□□ -1.48
BRCA1-217ENST00000487825 DCTN1Q14203 1278 aa5.78□□□□□ -1.48
BRCA1-217ENST00000487825 C9orf50Q5SZB4 431 aa5.78□□□□□ -1.48
BRCA1-217ENST00000487825 AKNAD1Q5T1N1 836 aa5.78□□□□□ -1.48
BRCA1-217ENST00000487825 TTLL5Q6EMB2 1281 aa5.78□□□□□ -1.48
BRCA1-217ENST00000487825 DDX42Q86XP3 938 aaKnown RBP eCLIP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms