RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 MYH9P35579 1960 aaKnown RBP13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 FAM237BA0A1B0GVD1 139 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 SPDYE16A6NNV3 312 aaPredicted RBP13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 RTN3O95197 1032 aaPredicted RBP13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 BGNP21810 368 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 GCLCP48506 637 aaPredicted RBP13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 RPS6KA3P51812 740 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 DYNLT1P63172 113 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 OGDHQ02218 1023 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 CDR2LQ86X02 465 aaPredicted RBP13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 RHPN2Q8IUC4 686 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 DEPTORQ8TB45 409 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 TRPM4Q8TD43 1214 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 PYROXD1Q8WU10 500 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 DCAKDQ8WVC6 231 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 CLPTM1LQ96KA5 538 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 PORCNQ9H237 461 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 SYNCQ9H7C4 482 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 ZNF302Q9NR11 478 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 STX18Q9P2W9 335 aaKnown RBP13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 MAFGO15525 162 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 VCPP55072 806 aaKnown RBP13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 ARL4CP56559 192 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 CDK16Q00536 496 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 LMNB2Q03252 620 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 AP1B1Q10567 949 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 DALRD3Q5D0E6 543 aaKnown RBP13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 SYCP2LQ5T4T6 812 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 ADGRD1Q6QNK2 874 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 MTHFD1LQ6UB35 978 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 CATSPERGQ6ZRH7 1159 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 PDCD7Q8N8D1 485 aaKnown RBP13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 TTC17Q96AE7 1141 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 TRIM11Q96F44 468 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 SERAC1Q96JX3 654 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 FAM111AQ96PZ2 611 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 TEX13BQ9BXU2 312 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 DHX33Q9H6R0 707 aaKnown RBP13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 PCMTD2Q9NV79 361 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 FARP1Q9Y4F1 1045 aaPredicted RBP13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 STYXL1Q9Y6J8 313 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 TNS1Q9HBL0 1735 aaKnown RBP13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 LOXHD1Q8IVV2 1947 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 KAT6AQ92794 2004 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 A0A0B4J269 797 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 OATP04181 439 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 GJB1P08034 283 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 RARBP10826 455 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 MYL2P10916 166 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 ESRRAP11474 423 aaPredicted RBP13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 ARL2P36404 184 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 LIN9Q5TKA1 542 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 XRRA1Q6P2D8 792 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 SPOCD1Q6ZMY3 1216 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 USP37Q86T82 979 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 FBXO36Q8NEA4 188 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 SHKBP1Q8TBC3 707 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 FEZF2Q8TBJ5 459 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 CPT1BQ92523 772 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 STMN2Q93045 179 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 FGD4Q96M96 766 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 DHRS4Q9BTZ2 278 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 ACAD9Q9H845 621 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 ZNF112Q9UJU3 913 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 MAFBQ9Y5Q3 323 aaPredicted RBP13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 KIAA1217Q5T5P2 1943 aa13.93□□□□□ -0.18
PDZRN3-208ENST00000479530 FCHO1O14526 889 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 HNRNPCL1O60812 293 aaKnown RBP13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 SERPINB4P48594 390 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 RTP1P59025 263 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 CAPSQ13938 189 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 HSF5Q4G112 596 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 CEP128Q6ZU80 1094 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 ENOSF1Q7L5Y1 443 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 TRIM50Q86XT4 487 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 TREML1Q86YW5 311 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 IGDCC3Q8IVU1 814 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 ZNF606Q8WXB4 792 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 ITFG2Q969R8 447 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 TRIM4Q9C037 500 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 VPS11Q9H270 941 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 ZNF395Q9H8N7 513 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 TJP2Q9UDY2 1190 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 SHOC2Q9UQ13 582 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 AFG3L2Q9Y4W6 797 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 NFASCO94856 1347 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 CENPFP49454 3210 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 ZC3H11AO75152 810 aaKnown RBP eCLIP13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 WEE2P0C1S8 567 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 PGM1P36871 562 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 ETV4P43268 484 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 NCOA4Q13772 614 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 TREML2Q5T2D2 321 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 DRICH1Q6PGQ1 229 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 RCOR2Q8IZ40 523 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 FAM161BQ96MY7 647 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 MCEEQ96PE7 176 aa13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 ZNF184Q99676 751 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 MRPL47Q9HD33 250 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms