RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 CAVIN2O95810 425 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 LDHAP00338 332 aaKnown RBP12.84□□□□□ -0.35
GCA-208ENST00000479199 TCF3P15923 654 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 HDCP19113 662 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 BDNFP23560 247 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 LMO2P25791 158 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 TXLNAP40222 546 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 STAT6P42226 847 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 LHX1P48742 406 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 NOVA1P51513 510 aaKnown RBP12.84□□□□□ -0.35
GCA-208ENST00000479199 CEBPZQ03701 1054 aaKnown RBP12.84□□□□□ -0.35
GCA-208ENST00000479199 C2orf27AQ580R0 203 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 C4orf50Q6ZRC1 276 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 SFTPA1Q8IWL2 248 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 GPD1LQ8N335 351 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 CCDC33Q8N5R6 958 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 FSIP1Q8NA03 581 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 GLIS3Q8NEA6 775 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 USP33Q8TEY7 942 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 HPDLQ96IR7 371 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 NME7Q9Y5B8 376 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 ZFHX4Q86UP3 3567 aa12.84□□□□□ -0.35
GCA-208ENST00000479199 PATE3B3GLJ2 98 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 K7EQS6 105 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 LEFTY2O00292 366 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 CYP17A1P05093 508 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 HNRNPLP14866 589 aaKnown RBP eCLIP12.83□□□□□ -0.36
GCA-208ENST00000479199 CYP27A1Q02318 531 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 RESTQ13127 1097 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 NR1H3Q13133 447 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 ALCAMQ13740 583 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 LIMS2Q7Z4I7 341 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 FILIP1Q7Z7B0 1213 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 RASSF3Q86WH2 238 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 TTC30AQ86WT1 665 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 CBWD2Q8IUF1 395 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 MDGA1Q8NFP4 955 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 HPS3Q969F9 1004 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 ANKRD36BP1Q96IX9 119 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 SPATA17Q96L03 361 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 PANK4Q9NVE7 773 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 MAGEC2Q9UBF1 373 aaPredicted RBP12.83□□□□□ -0.36
GCA-208ENST00000479199 RALYQ9UKM9 306 aaKnown RBP12.83□□□□□ -0.36
GCA-208ENST00000479199 CDH9Q9ULB4 789 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 PCDHB13Q9Y5F0 798 aa12.83□□□□□ -0.36
GCA-208ENST00000479199 SRPRBQ9Y5M8 271 aaKnown RBP12.83□□□□□ -0.36
GCA-208ENST00000479199 TNNC2P02585 160 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 PDGFRBP09619 1106 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 WARSP23381 471 aaKnown RBP12.82□□□□□ -0.36
GCA-208ENST00000479199 ANXA13P27216 316 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 GRIK1P39086 918 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 ZNF252P-AS1Q0IIN9 211 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 MESP2Q0VG99 397 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 MYO1EQ12965 1108 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 MDH1BQ5I0G3 518 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 VSTM1Q6UX27 236 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 CCDC73Q6ZRK6 1079 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 DENND5BQ6ZUT9 1274 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 CYP2U1Q7Z449 544 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 PCED1BQ96HM7 432 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 CNOT6LQ96LI5 555 aaKnown RBP12.82□□□□□ -0.36
GCA-208ENST00000479199 MRPL45Q9BRJ2 306 aaKnown RBP12.82□□□□□ -0.36
GCA-208ENST00000479199 PANK2Q9BZ23 570 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 TMEM30AQ9NV96 361 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 SMPD4Q9NXE4 827 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 TRPM5Q9NZQ8 1165 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 MMP17Q9ULZ9 603 aa12.82□□□□□ -0.36
GCA-208ENST00000479199 PCDH15Q96QU1 1955 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 ZNF840PA6NDX5 716 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 F8VP50 259 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 OLFM2O95897 454 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 CHRM1P11229 460 aaPredicted RBP12.81□□□□□ -0.36
GCA-208ENST00000479199 DHPSP49366 369 aaPredicted RBP12.81□□□□□ -0.36
GCA-208ENST00000479199 PDE6CP51160 858 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 CACNA2D1P54289 1103 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 KDSRQ06136 332 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 IFRD2Q12894 506 aaPredicted RBP12.81□□□□□ -0.36
GCA-208ENST00000479199 FOXC1Q12948 553 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 CRY1Q16526 586 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 USP39Q53GS9 565 aaKnown RBP12.81□□□□□ -0.36
GCA-208ENST00000479199 SH3PXD2AQ5TCZ1 1133 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 TMEM92Q6UXU6 159 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 DPH6Q7L8W6 267 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 C12orf40Q86WS4 652 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 ALLCQ8N6M5 410 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 PDILTQ8N807 584 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 MMS19Q96T76 1030 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 TTLL2Q9BWV7 592 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 RNF38Q9H0F5 515 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 ZDHHC4Q9NPG8 344 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 HSPBP1Q9NZL4 362 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 R3HCC1Q9Y3T6 440 aaKnown RBP12.81□□□□□ -0.36
GCA-208ENST00000479199 CPQQ9Y646 472 aa12.81□□□□□ -0.36
GCA-208ENST00000479199 AKAP13Q12802 2813 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 ZFYVE26Q68DK2 2539 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 ZNF233A6NK53 670 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 C1QTNF9BB2RNN3 333 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 TRIM66O15016 1216 aa12.8□□□□□ -0.36
GCA-208ENST00000479199 KHNYNO15037 678 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms