RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 CEP250Q9BV73 2442 aa24.34■■□□□ 1.49
C9orf3-216ENST00000478603 A8MXQ7 604 aa24.33■■□□□ 1.49
C9orf3-216ENST00000478603 CLDN5O00501 218 aa24.33■■□□□ 1.49
C9orf3-216ENST00000478603 PAPSS2O95340 614 aaPredicted RBP24.33■■□□□ 1.49
C9orf3-216ENST00000478603 FAM163BP0C2L3 166 aa24.33■■□□□ 1.49
C9orf3-216ENST00000478603 HDCP19113 662 aa24.33■■□□□ 1.49
C9orf3-216ENST00000478603 ATICP31939 592 aa24.33■■□□□ 1.49
C9orf3-216ENST00000478603 RAP1GAPP47736 663 aa24.33■■□□□ 1.49
C9orf3-216ENST00000478603 CDH8P55286 799 aa24.33■■□□□ 1.49
C9orf3-216ENST00000478603 PSMD2Q13200 908 aa24.33■■□□□ 1.49
C9orf3-216ENST00000478603 SRSF5Q13243 272 aaKnown RBP24.33■■□□□ 1.49
C9orf3-216ENST00000478603 KCNB1Q14721 858 aa24.33■■□□□ 1.49
C9orf3-216ENST00000478603 PDGFRLQ15198 375 aa24.33■■□□□ 1.49
C9orf3-216ENST00000478603 SYNPOQ8N3V7 929 aa24.33■■□□□ 1.49
C9orf3-216ENST00000478603 SH3RF2Q8TEC5 729 aa24.33■■□□□ 1.49
C9orf3-216ENST00000478603 B3GNT5Q9BYG0 378 aa24.33■■□□□ 1.49
C9orf3-216ENST00000478603 ZNF518BQ9C0D4 1074 aa24.33■■□□□ 1.49
C9orf3-216ENST00000478603 FBRSL1Q9HCM7 1045 aaKnown RBP24.33■■□□□ 1.49
C9orf3-216ENST00000478603 DUS2Q9NX74 493 aaKnown RBP24.33■■□□□ 1.49
C9orf3-216ENST00000478603 TRDMT1O14717 391 aaKnown RBP24.32■■□□□ 1.48
C9orf3-216ENST00000478603 C4BPAP04003 597 aaKnown RBP24.32■■□□□ 1.48
C9orf3-216ENST00000478603 PRR29P0C7W0 189 aa24.32■■□□□ 1.48
C9orf3-216ENST00000478603 DLG4P78352 724 aa24.32■■□□□ 1.48
C9orf3-216ENST00000478603 GRSF1Q12849 480 aaKnown RBP eCLIP24.32■■□□□ 1.48
C9orf3-216ENST00000478603 ZNF699Q32M78 642 aa24.32■■□□□ 1.48
C9orf3-216ENST00000478603 SCARA5Q6ZMJ2 495 aa24.32■■□□□ 1.48
C9orf3-216ENST00000478603 PRR23BQ6ZRT6 265 aa24.32■■□□□ 1.48
C9orf3-216ENST00000478603 B3GALNT2Q8NCR0 500 aa24.32■■□□□ 1.48
C9orf3-216ENST00000478603 OSCP1Q8WVF1 389 aa24.32■■□□□ 1.48
C9orf3-216ENST00000478603 SECISBP2LQ93073 1101 aaKnown RBP24.32■■□□□ 1.48
C9orf3-216ENST00000478603 C8orf48Q96LL4 319 aa24.32■■□□□ 1.48
C9orf3-216ENST00000478603 ECT2Q9H8V3 914 aa24.32■■□□□ 1.48
C9orf3-216ENST00000478603 TRPM5Q9NZQ8 1165 aa24.32■■□□□ 1.48
C9orf3-216ENST00000478603 USP25Q9UHP3 1055 aa24.32■■□□□ 1.48
C9orf3-216ENST00000478603 HRO43593 1189 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 VNN1O95497 513 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 EGFP01133 1207 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 NR3C1P04150 777 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 RPN1P04843 607 aaKnown RBP24.31■■□□□ 1.48
C9orf3-216ENST00000478603 GJA4P35212 333 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 SYKP43405 635 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 IFNAR2P48551 515 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 NDUFA8P51970 172 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 CLDN10P78369 228 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 ZXDBP98169 803 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 NCOA4Q13772 614 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 SLC9A9Q8IVB4 645 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 CPA6Q8N4T0 437 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 CEP295NLQ96MC4 621 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 TTLL2Q9BWV7 592 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 RAB23Q9ULC3 237 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 MYO16Q9Y6X6 1858 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 MYH10P35580 1976 aa24.31■■□□□ 1.48
C9orf3-216ENST00000478603 GALK1P51570 392 aa24.3■■□□□ 1.48
C9orf3-216ENST00000478603 AP3M2P53677 418 aa24.3■■□□□ 1.48
C9orf3-216ENST00000478603 NOP14P78316 857 aaKnown RBP24.3■■□□□ 1.48
C9orf3-216ENST00000478603 IFRD2Q12894 506 aaPredicted RBP24.3■■□□□ 1.48
C9orf3-216ENST00000478603 EML3Q32P44 896 aa24.3■■□□□ 1.48
C9orf3-216ENST00000478603 ZNF667Q5HYK9 610 aa24.3■■□□□ 1.48
C9orf3-216ENST00000478603 LONP2Q86WA8 852 aa24.3■■□□□ 1.48
C9orf3-216ENST00000478603 ELOVL4Q9GZR5 314 aa24.3■■□□□ 1.48
C9orf3-216ENST00000478603 SDCBP2Q9H190 292 aa24.3■■□□□ 1.48
C9orf3-216ENST00000478603 LINC00597Q9H2U6 94 aa24.3■■□□□ 1.48
C9orf3-216ENST00000478603 VRTNQ9H8Y1 702 aa24.3■■□□□ 1.48
C9orf3-216ENST00000478603 POLR3BQ9NW08 1133 aaPredicted RBP24.3■■□□□ 1.48
C9orf3-216ENST00000478603 GMEB2Q9UKD1 530 aa24.3■■□□□ 1.48
C9orf3-216ENST00000478603 ARHGAP26Q9UNA1 814 aa24.3■■□□□ 1.48
C9orf3-216ENST00000478603 GTF3C3Q9Y5Q9 886 aa24.3■■□□□ 1.48
C9orf3-216ENST00000478603 RALGAPA1Q6GYQ0 2036 aa24.3■■□□□ 1.48
C9orf3-216ENST00000478603 ZNF840PA6NDX5 716 aa24.29■■□□□ 1.48
C9orf3-216ENST00000478603 PDXKO00764 312 aa24.29■■□□□ 1.48
C9orf3-216ENST00000478603 ABL1P00519 1130 aa24.29■■□□□ 1.48
C9orf3-216ENST00000478603 AMPD2Q01433 879 aa24.29■■□□□ 1.48
C9orf3-216ENST00000478603 TAF10Q12962 218 aa24.29■■□□□ 1.48
C9orf3-216ENST00000478603 SIM2Q14190 667 aaPredicted RBP24.29■■□□□ 1.48
C9orf3-216ENST00000478603 CEP135Q66GS9 1140 aa24.29■■□□□ 1.48
C9orf3-216ENST00000478603 ERMP1Q7Z2K6 904 aa24.29■■□□□ 1.48
C9orf3-216ENST00000478603 P2RY13Q9BPV8 354 aa24.29■■□□□ 1.48
C9orf3-216ENST00000478603 RNF38Q9H0F5 515 aa24.29■■□□□ 1.48
C9orf3-216ENST00000478603 RNF40O75150 1001 aa24.28■■□□□ 1.48
C9orf3-216ENST00000478603 MYL1P05976 194 aa24.28■■□□□ 1.48
C9orf3-216ENST00000478603 PXNP49023 591 aaPredicted RBP24.28■■□□□ 1.48
C9orf3-216ENST00000478603 TMEM174Q8WUU8 243 aa24.28■■□□□ 1.48
C9orf3-216ENST00000478603 ATP2A3Q93084 1043 aa24.28■■□□□ 1.48
C9orf3-216ENST00000478603 PARD6AQ9NPB6 346 aa24.28■■□□□ 1.48
C9orf3-216ENST00000478603 EHD2Q9NZN4 543 aa24.28■■□□□ 1.48
C9orf3-216ENST00000478603 USP18Q9UMW8 372 aa24.28■■□□□ 1.48
C9orf3-216ENST00000478603 KIAA1549LQ6ZVL6 1849 aa24.28■■□□□ 1.48
C9orf3-216ENST00000478603 SDK1Q7Z5N4 2213 aa24.27■■□□□ 1.48
C9orf3-216ENST00000478603 MYOFQ9NZM1 2061 aa24.27■■□□□ 1.48
C9orf3-216ENST00000478603 FAM237AA0A1B0GTK4 181 aa24.27■■□□□ 1.48
C9orf3-216ENST00000478603 LEFTY2O00292 366 aa24.27■■□□□ 1.48
C9orf3-216ENST00000478603 TCF3P15923 654 aa24.27■■□□□ 1.48
C9orf3-216ENST00000478603 TGM1P22735 817 aa24.27■■□□□ 1.48
C9orf3-216ENST00000478603 PDE6CP51160 858 aa24.27■■□□□ 1.48
C9orf3-216ENST00000478603 FOXK2Q01167 660 aa24.27■■□□□ 1.48
C9orf3-216ENST00000478603 RSPO4Q2I0M5 234 aaPredicted RBP24.27■■□□□ 1.48
C9orf3-216ENST00000478603 ZACNQ401N2 412 aa24.27■■□□□ 1.48
C9orf3-216ENST00000478603 LAIR1Q6GTX8 287 aa24.27■■□□□ 1.48
C9orf3-216ENST00000478603 KCNK16Q96T55 309 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms