RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PRRC2BQ5JSZ5 2229 aaKnown RBP11.5□□□□□ -0.57
COL27A1-204ENST00000477421 A0A0B4J269 797 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 BNIP3LO60238 219 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 MICAL2O94851 1124 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 FSTL1Q12841 308 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 LRRC36Q1X8D7 754 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 EXOC3L1Q86VI1 746 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 MYCBPQ99417 103 aaPredicted RBP11.49□□□□□ -0.57
COL27A1-204ENST00000477421 CDT1Q9H211 546 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 UBP1Q9NZI7 540 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 APOBEC2Q9Y235 224 aaKnown RBP11.49□□□□□ -0.57
COL27A1-204ENST00000477421 LAMB4A4D0S4 1761 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 H3BRJ5 948 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 DNALI1O14645 258 aaPredicted RBP11.49□□□□□ -0.57
COL27A1-204ENST00000477421 OPHN1O60890 802 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 MSL3Q8N5Y2 521 aaKnown RBP11.49□□□□□ -0.57
COL27A1-204ENST00000477421 OR6P1Q8NGX9 317 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 DNAJB3Q8WWF6 145 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 HDAC11Q96DB2 347 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 SH3GL2Q99962 352 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 FSD1LQ9BXM9 530 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 SLCO1B3Q9NPD5 702 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 AFG3L2Q9Y4W6 797 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 PKD1L3Q7Z443 1732 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 KCNK1O00180 336 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 NEMP1O14524 444 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 FSCN2O14926 492 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 GAS2O43903 313 aaKnown RBP11.49□□□□□ -0.57
COL27A1-204ENST00000477421 PLA2G6O60733 806 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 NOTUMQ6P988 496 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 MYLK4Q86YV6 388 aaPredicted RBP11.49□□□□□ -0.57
COL27A1-204ENST00000477421 GRAMD1AQ96CP6 724 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 MANSC1Q9H8J5 431 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 APOBEC3GQ9HC16 384 aaKnown RBP11.49□□□□□ -0.57
COL27A1-204ENST00000477421 BTBD7Q9P203 1132 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 ARHGAP28Q9P2N2 729 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.49□□□□□ -0.57
COL27A1-204ENST00000477421 L3MBTL1Q9Y468 752 aa11.49□□□□□ -0.57
COL27A1-204ENST00000477421 ZNF541Q9H0D2 1346 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 COL18A1P39060 1754 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 ONECUT3O60422 494 aaPredicted RBP11.48□□□□□ -0.57
COL27A1-204ENST00000477421 B3GAT3O94766 335 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 FARP2O94887 1054 aaPredicted RBP11.48□□□□□ -0.57
COL27A1-204ENST00000477421 PYGBP11216 843 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 STIP1P31948 543 aaKnown RBP11.48□□□□□ -0.57
COL27A1-204ENST00000477421 EPHX2P34913 555 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 ATXN3P54252 364 aaPredicted RBP11.48□□□□□ -0.57
COL27A1-204ENST00000477421 HUNKP57058 714 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 SP2Q02086 613 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 MCL1Q07820 350 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 MORF4L2Q15014 288 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 C1orf146Q5VVC0 180 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 CES3Q6UWW8 571 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 LONP2Q86WA8 852 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 ZNF518BQ9C0D4 1074 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 DDIT4Q9NX09 232 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 ATRNL1Q5VV63 1379 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 LSM8O95777 96 aaKnown RBP11.48□□□□□ -0.57
COL27A1-204ENST00000477421 ASS1P00966 412 aaKnown RBP11.48□□□□□ -0.57
COL27A1-204ENST00000477421 HMBSP08397 361 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 SNRPAP09012 282 aaKnown RBP11.48□□□□□ -0.57
COL27A1-204ENST00000477421 ADRA1DP25100 572 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 EPHB2P29323 1055 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 CD302Q8IX05 232 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 C12orf56Q8IXR9 622 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 C3orf20Q8ND61 904 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 GABPB2Q8TAK5 448 aaPredicted RBP11.48□□□□□ -0.57
COL27A1-204ENST00000477421 PDCD6IPQ8WUM4 868 aaKnown RBP11.48□□□□□ -0.57
COL27A1-204ENST00000477421 VCPIP1Q96JH7 1222 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 TMEM237Q96Q45 408 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 ACO2Q99798 780 aaKnown RBP11.48□□□□□ -0.57
COL27A1-204ENST00000477421 CCDC68Q9H2F9 335 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 LRRC19Q9H756 370 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 TSR3Q9UJK0 312 aaKnown RBP11.48□□□□□ -0.57
COL27A1-204ENST00000477421 IRS2Q9Y4H2 1338 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 CFAP73A6NFT4 308 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 CELF2O95319 508 aaKnown RBP11.48□□□□□ -0.57
COL27A1-204ENST00000477421 GNAT1P11488 350 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 CALRP27797 417 aaKnown RBP11.48□□□□□ -0.57
COL27A1-204ENST00000477421 COPS2P61201 443 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 SLC12A1Q13621 1099 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 CHI3L2Q15782 390 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 SLFN11Q7Z7L1 901 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 RASSF3Q86WH2 238 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 NLGN2Q8NFZ4 835 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 ZNF516Q92618 1163 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 NOD2Q9HC29 1040 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 HEY2Q9UBP5 337 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 LAMA4Q16363 1823 aa11.48□□□□□ -0.57
COL27A1-204ENST00000477421 KBTBD13C9JR72 458 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 SPECC1L-ADORA2AF8WAN1 911 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 NFKBIEO00221 500 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 PDHXO00330 501 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 USP12O75317 370 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 LGALS2P05162 132 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 CRADDP78560 199 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 PTK6Q13882 451 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 ANKRD20A8PQ5CZ79 823 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 KATNAL2Q8IYT4 538 aa11.47□□□□□ -0.57
COL27A1-204ENST00000477421 GPC2Q8N158 579 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms