RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 CYP8B1Q9UNU6 501 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 COL5A1P20908 1838 aaPredicted RBP12.18□□□□□ -0.46
COMMD2-202ENST00000469896 AHCTF1Q8WYP5 2266 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 MYO16Q9Y6X6 1858 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.17□□□□□ -0.46
COMMD2-202ENST00000469896 SLC27A2O14975 620 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 GPR37O15354 613 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 F11P03951 625 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 GABRG2P18507 467 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 TYMPP19971 482 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 ATP2B1P20020 1258 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 EIF2DP41214 584 aaKnown RBP12.17□□□□□ -0.46
COMMD2-202ENST00000469896 GRIA2P42262 883 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 TNFRSF4P43489 277 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 DMP1Q13316 513 aaPredicted RBP12.17□□□□□ -0.46
COMMD2-202ENST00000469896 ZNF568Q3ZCX4 644 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 SLC39A12Q504Y0 691 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 ARHGAP40Q5TG30 622 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 SLFN12Q8IYM2 578 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 ZCCHC9Q8N567 271 aaKnown RBP12.17□□□□□ -0.46
COMMD2-202ENST00000469896 C2orf15Q8WU43 125 aaKnown RBP12.17□□□□□ -0.46
COMMD2-202ENST00000469896 MIR1-1HGQ9H1L0 117 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 UXTQ9UBK9 157 aaPredicted RBP12.17□□□□□ -0.46
COMMD2-202ENST00000469896 FTSJ1Q9UET6 329 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 TNFSF13BQ9Y275 285 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 PCDHGA1Q9Y5H4 931 aa12.17□□□□□ -0.46
COMMD2-202ENST00000469896 ANTXRLA6NF34 631 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 BAG4O95429 457 aaKnown RBP12.16□□□□□ -0.46
COMMD2-202ENST00000469896 HOXB2P14652 356 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 MAOBP27338 520 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 KIR2DL1P43626 348 aaPredicted RBP12.16□□□□□ -0.46
COMMD2-202ENST00000469896 SMARCB1Q12824 385 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 MYO1EQ12965 1108 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 RESTQ13127 1097 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 SERINC3Q13530 473 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 INF2Q27J81 1249 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 BLOC1S3Q6QNY0 202 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 CEP120Q8N960 986 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 ZNF248Q8NDW4 579 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 SH3RF2Q8TEC5 729 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 NAP1L4Q99733 375 aaKnown RBP12.16□□□□□ -0.46
COMMD2-202ENST00000469896 EIF2AK1Q9BQI3 630 aaKnown RBP12.16□□□□□ -0.46
COMMD2-202ENST00000469896 PRR14Q9BWN1 585 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 RNF26Q9BY78 433 aaPredicted RBP12.16□□□□□ -0.46
COMMD2-202ENST00000469896 LINC00597Q9H2U6 94 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 ARHGEF4Q9NR80 690 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 MAGED2Q9UNF1 606 aaPredicted RBP12.16□□□□□ -0.46
COMMD2-202ENST00000469896 BTBD3Q9Y2F9 522 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 PCDHB3Q9Y5E6 796 aa12.16□□□□□ -0.46
COMMD2-202ENST00000469896 STK36Q9NRP7 1315 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 BCAT2O15382 392 aaPredicted RBP12.15□□□□□ -0.46
COMMD2-202ENST00000469896 BRINP1O60477 761 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 KRT38O76015 456 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 EDN1P05305 212 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 CSH1P0DML2 217 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 CSH2P0DML3 217 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 ODC1P11926 461 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 XRCC6P12956 609 aaKnown RBP eCLIP12.15□□□□□ -0.46
COMMD2-202ENST00000469896 AARSP49588 968 aaKnown RBP eCLIP12.15□□□□□ -0.46
COMMD2-202ENST00000469896 PDE6CP51160 858 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 TARDBPQ13148 414 aaKnown RBP eCLIP12.15□□□□□ -0.46
COMMD2-202ENST00000469896 KCNB1Q14721 858 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 TBC1D25Q3MII6 688 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 C4orf17Q53FE4 359 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 NT5DC1Q5TFE4 455 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 EMC10Q5UCC4 262 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 CREB3L3Q68CJ9 461 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 DHX32Q7L7V1 743 aaKnown RBP12.15□□□□□ -0.46
COMMD2-202ENST00000469896 BLIDQ8IZY5 108 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 ZNF513Q8N8E2 541 aaPredicted RBP12.15□□□□□ -0.46
COMMD2-202ENST00000469896 SPPL2BQ8TCT7 592 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 PIGOQ8TEQ8 1089 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 DNASE2BQ8WZ79 361 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 HAS1Q92839 578 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 IFT74Q96LB3 600 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 HSD17B14Q9BPX1 270 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 TCHPQ9BT92 498 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 SLC26A6Q9BXS9 759 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 CDT1Q9H211 546 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 RWDD1Q9H446 243 aaPredicted RBP12.15□□□□□ -0.46
COMMD2-202ENST00000469896 SEPT3Q9UH03 358 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 PAXBP1Q9Y5B6 917 aa12.15□□□□□ -0.46
COMMD2-202ENST00000469896 A0A0A0MRY4 1105 aa12.14□□□□□ -0.47
COMMD2-202ENST00000469896 K7ERI5 159 aa12.14□□□□□ -0.47
COMMD2-202ENST00000469896 CCNT1O60563 726 aaKnown RBP12.14□□□□□ -0.47
COMMD2-202ENST00000469896 ADH1CP00326 375 aa12.14□□□□□ -0.47
COMMD2-202ENST00000469896 C1SP09871 688 aa12.14□□□□□ -0.47
COMMD2-202ENST00000469896 MCF2P10911 925 aa12.14□□□□□ -0.47
COMMD2-202ENST00000469896 TCF3P15923 654 aa12.14□□□□□ -0.47
COMMD2-202ENST00000469896 HMGA1P17096 107 aaKnown RBP12.14□□□□□ -0.47
COMMD2-202ENST00000469896 FECHP22830 423 aa12.14□□□□□ -0.47
COMMD2-202ENST00000469896 PCBP4P57723 403 aaKnown RBP12.14□□□□□ -0.47
COMMD2-202ENST00000469896 SF3A1Q15459 793 aaKnown RBP12.14□□□□□ -0.47
COMMD2-202ENST00000469896 RNF20Q5VTR2 975 aa12.14□□□□□ -0.47
COMMD2-202ENST00000469896 SDE2Q6IQ49 451 aa12.14□□□□□ -0.47
COMMD2-202ENST00000469896 GALNT17Q6IS24 598 aa12.14□□□□□ -0.47
COMMD2-202ENST00000469896 ATG14Q6ZNE5 492 aa12.14□□□□□ -0.47
COMMD2-202ENST00000469896 NEK8Q86SG6 692 aa12.14□□□□□ -0.47
COMMD2-202ENST00000469896 ERICH1Q86X53 443 aa12.14□□□□□ -0.47
COMMD2-202ENST00000469896 FSIP1Q8NA03 581 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms