RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 IFNAR2P48551 515 aa23.21■■□□□ 1.31
TTC28-204ENST00000468807 AP3M2P53677 418 aa23.21■■□□□ 1.31
TTC28-204ENST00000468807 GRSF1Q12849 480 aaKnown RBP eCLIP23.21■■□□□ 1.31
TTC28-204ENST00000468807 CCINQ13939 588 aa23.21■■□□□ 1.31
TTC28-204ENST00000468807 LPAL2Q16609 132 aa23.21■■□□□ 1.31
TTC28-204ENST00000468807 ZNF667Q5HYK9 610 aa23.21■■□□□ 1.31
TTC28-204ENST00000468807 HEATR6Q6AI08 1181 aaKnown RBP23.21■■□□□ 1.31
TTC28-204ENST00000468807 B3GALNT2Q8NCR0 500 aa23.21■■□□□ 1.31
TTC28-204ENST00000468807 ZNF518BQ9C0D4 1074 aa23.21■■□□□ 1.31
TTC28-204ENST00000468807 XYLT2Q9H1B5 865 aa23.21■■□□□ 1.31
TTC28-204ENST00000468807 KCTD10Q9H3F6 313 aa23.21■■□□□ 1.31
TTC28-204ENST00000468807 EHD2Q9NZN4 543 aa23.21■■□□□ 1.31
TTC28-204ENST00000468807 RAB23Q9ULC3 237 aa23.21■■□□□ 1.31
TTC28-204ENST00000468807 WNT6Q9Y6F9 365 aa23.21■■□□□ 1.31
TTC28-204ENST00000468807 ATG2BQ96BY7 2078 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 CLDN5O00501 218 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 CALUO43852 315 aaPredicted RBP23.2■■□□□ 1.3
TTC28-204ENST00000468807 FAM163BP0C2L3 166 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 CDH8P55286 799 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 DLG4P78352 724 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 AMPD2Q01433 879 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 DMWDQ09019 674 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 ZNF77Q15935 545 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 PRR23BQ6ZRT6 265 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 SLC9A9Q8IVB4 645 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 CPA6Q8N4T0 437 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 SH3RF2Q8TEC5 729 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 CEP295NLQ96MC4 621 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 MED10Q9BTT4 135 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 ELOVL4Q9GZR5 314 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 DMAC2Q9NW81 257 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 FRMD4BQ9Y2L6 1034 aa23.2■■□□□ 1.3
TTC28-204ENST00000468807 CHURC1-FNTBB4DL54 471 aa23.19■■□□□ 1.3
TTC28-204ENST00000468807 PDXKO00764 312 aa23.19■■□□□ 1.3
TTC28-204ENST00000468807 FNTBP49356 437 aa23.19■■□□□ 1.3
TTC28-204ENST00000468807 PDE6CP51160 858 aa23.19■■□□□ 1.3
TTC28-204ENST00000468807 CACNA2D1P54289 1103 aa23.19■■□□□ 1.3
TTC28-204ENST00000468807 SYNPOQ8N3V7 929 aa23.19■■□□□ 1.3
TTC28-204ENST00000468807 OSCP1Q8WVF1 389 aa23.19■■□□□ 1.3
TTC28-204ENST00000468807 C8orf48Q96LL4 319 aa23.19■■□□□ 1.3
TTC28-204ENST00000468807 B3GNT5Q9BYG0 378 aa23.19■■□□□ 1.3
TTC28-204ENST00000468807 SCAND2PQ9GZW5 306 aaPredicted RBP23.19■■□□□ 1.3
TTC28-204ENST00000468807 C2orf42Q9NWW7 574 aa23.19■■□□□ 1.3
TTC28-204ENST00000468807 GCNT4Q9P109 453 aa23.19■■□□□ 1.3
TTC28-204ENST00000468807 MAPK8IP1Q9UQF2 711 aa23.19■■□□□ 1.3
TTC28-204ENST00000468807 HELZP42694 1942 aaKnown RBP23.19■■□□□ 1.3
TTC28-204ENST00000468807 KIF20AO95235 890 aa23.18■■□□□ 1.3
TTC28-204ENST00000468807 C4BPAP04003 597 aaKnown RBP23.18■■□□□ 1.3
TTC28-204ENST00000468807 USP4Q13107 963 aa23.18■■□□□ 1.3
TTC28-204ENST00000468807 FSTL4Q6MZW2 842 aa23.18■■□□□ 1.3
TTC28-204ENST00000468807 ATP2A3Q93084 1043 aa23.18■■□□□ 1.3
TTC28-204ENST00000468807 ECT2Q9H8V3 914 aa23.18■■□□□ 1.3
TTC28-204ENST00000468807 GDPD2Q9HCC8 539 aa23.18■■□□□ 1.3
TTC28-204ENST00000468807 GMEB2Q9UKD1 530 aa23.18■■□□□ 1.3
TTC28-204ENST00000468807 ATP8B3O60423 1300 aa23.17■■□□□ 1.3
TTC28-204ENST00000468807 VNN1O95497 513 aa23.17■■□□□ 1.3
TTC28-204ENST00000468807 P4HA1P13674 534 aa23.17■■□□□ 1.3
TTC28-204ENST00000468807 GJA4P35212 333 aa23.17■■□□□ 1.3
TTC28-204ENST00000468807 NOP14P78316 857 aaKnown RBP23.17■■□□□ 1.3
TTC28-204ENST00000468807 CLDN10P78369 228 aa23.17■■□□□ 1.3
TTC28-204ENST00000468807 TAF10Q12962 218 aa23.17■■□□□ 1.3
TTC28-204ENST00000468807 TMEM196Q5HYL7 178 aa23.17■■□□□ 1.3
TTC28-204ENST00000468807 EXOC4Q96A65 974 aa23.17■■□□□ 1.3
TTC28-204ENST00000468807 CHFRQ96EP1 664 aa23.17■■□□□ 1.3
TTC28-204ENST00000468807 SLITRK1Q96PX8 696 aa23.17■■□□□ 1.3
TTC28-204ENST00000468807 TTLL2Q9BWV7 592 aa23.17■■□□□ 1.3
TTC28-204ENST00000468807 VRTNQ9H8Y1 702 aa23.17■■□□□ 1.3
TTC28-204ENST00000468807 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.17■■□□□ 1.3
TTC28-204ENST00000468807 TMEM30AQ9NV96 361 aa23.17■■□□□ 1.3
TTC28-204ENST00000468807 ARHGAP26Q9UNA1 814 aa23.17■■□□□ 1.3
TTC28-204ENST00000468807 ZNF840PA6NDX5 716 aa23.16■■□□□ 1.3
TTC28-204ENST00000468807 K7ESF4 209 aa23.16■■□□□ 1.3
TTC28-204ENST00000468807 TRDMT1O14717 391 aaKnown RBP23.16■■□□□ 1.3
TTC28-204ENST00000468807 EGFP01133 1207 aa23.16■■□□□ 1.3
TTC28-204ENST00000468807 PIK3CAP42336 1068 aa23.16■■□□□ 1.3
TTC28-204ENST00000468807 GALK1P51570 392 aa23.16■■□□□ 1.3
TTC28-204ENST00000468807 SRSF5Q13243 272 aaKnown RBP23.16■■□□□ 1.3
TTC28-204ENST00000468807 NAIF1Q69YI7 327 aaPredicted RBP23.16■■□□□ 1.3
TTC28-204ENST00000468807 PKN3Q6P5Z2 889 aa23.16■■□□□ 1.3
TTC28-204ENST00000468807 KRBA2Q6ZNG9 492 aa23.16■■□□□ 1.3
TTC28-204ENST00000468807 RMDN1Q96DB5 314 aa23.16■■□□□ 1.3
TTC28-204ENST00000468807 TNIP3Q96KP6 325 aa23.16■■□□□ 1.3
TTC28-204ENST00000468807 P2RY13Q9BPV8 354 aa23.16■■□□□ 1.3
TTC28-204ENST00000468807 GOLPH3LQ9H4A5 285 aa23.16■■□□□ 1.3
TTC28-204ENST00000468807 DNAH14Q0VDD8 3507 aa23.16■■□□□ 1.3
TTC28-204ENST00000468807 MYH10P35580 1976 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 FAM237AA0A1B0GTK4 181 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 A0A1W2PQ27 194 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 A0A1W2PQ64 194 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 A0A1W2PQD8 194 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 RNF40O75150 1001 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 RHOBTB3O94955 611 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 PAPSS2O95340 614 aaPredicted RBP23.15■■□□□ 1.3
TTC28-204ENST00000468807 NR2F2P24468 414 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 HOXC13P31276 330 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 PPP3CCP48454 512 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 DPYDQ12882 1025 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 ORC1Q13415 861 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 SIM2Q14190 667 aaPredicted RBP23.15■■□□□ 1.3
TTC28-204ENST00000468807 SGSM1Q2NKQ1 1148 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms