RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-212ENST00000466845 RSPH14Q9UHP6 348 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 MAPRE3Q9UPY8 281 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 PRELID1Q9Y255 219 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 SNX8Q9Y5X2 465 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 CCDC141Q6ZP82 1450 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 MROH2AA6NES4 1674 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 PI4K2BG5E9Z4 385 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 UBXN8O00124 270 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 CAPN9O14815 690 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 PLD2O14939 933 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 TBX18O95935 607 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 C4BPAP04003 597 aaKnown RBP6.13□□□□□ -1.43
LRCH3-212ENST00000466845 TMEM11P17152 192 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 KRT15P19012 456 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 HDCP19113 662 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 AOAHP28039 575 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 CSF2RBP32927 897 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 TCF7P36402 384 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-212ENST00000466845 NPTX2P47972 431 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 CCT8P50990 548 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 ATXN1P54253 815 aaKnown RBP6.13□□□□□ -1.43
LRCH3-212ENST00000466845 ZBTB16Q05516 673 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 PABPC4Q13310 644 aaKnown RBP eCLIP6.13□□□□□ -1.43
LRCH3-212ENST00000466845 DPYSQ14117 519 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 BECN1Q14457 450 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 GEN1Q17RS7 908 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 ARHGAP29Q52LW3 1261 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 FNDC3BQ53EP0 1204 aaKnown RBP6.13□□□□□ -1.43
LRCH3-212ENST00000466845 CCDC183Q5T5S1 534 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 IKBIPQ70UQ0 350 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 FAM114A1Q8IWE2 563 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 MYCT1Q8N699 235 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 DNERQ8NFT8 737 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 MDM1Q8TC05 714 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 CLIP3Q96DZ5 547 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 GLT8D2Q9H1C3 349 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 WNT5BQ9H1J7 359 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 C2orf40Q9H1Z8 148 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 SLC12A5Q9H2X9 1139 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 LIN28AQ9H9Z2 209 aaKnown RBP6.13□□□□□ -1.43
LRCH3-212ENST00000466845 GRPEL1Q9HAV7 217 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 AGO4Q9HCK5 861 aaKnown RBP6.13□□□□□ -1.43
LRCH3-212ENST00000466845 KCNH7Q9NS40 1196 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 HOMER3Q9NSC5 361 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 AATFQ9NY61 560 aaKnown RBP eCLIP6.13□□□□□ -1.43
LRCH3-212ENST00000466845 IFT80Q9P2H3 777 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-212ENST00000466845 PTBP2Q9UKA9 531 aaKnown RBP6.13□□□□□ -1.43
LRCH3-212ENST00000466845 CGNL1Q0VF96 1302 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 LRRC9Q6ZRR7 1453 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 PLXNC1O60486 1568 aa6.13□□□□□ -1.43
LRCH3-212ENST00000466845 GPR39O43194 453 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 CEP104O60308 925 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 DAB1O75553 588 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 APOA4P06727 396 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 ZNF20P17024 532 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 LPOP22079 712 aaPredicted RBP6.12□□□□□ -1.43
LRCH3-212ENST00000466845 SOX6P35712 828 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 SULT1E1P49888 294 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 CLTCQ00610 1675 aaKnown RBP6.12□□□□□ -1.43
LRCH3-212ENST00000466845 ACY1Q03154 408 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 GABPB1Q06547 395 aaPredicted RBP6.12□□□□□ -1.43
LRCH3-212ENST00000466845 TOP3AQ13472 1001 aaPredicted RBP6.12□□□□□ -1.43
LRCH3-212ENST00000466845 RBBP5Q15291 538 aaKnown RBP6.12□□□□□ -1.43
LRCH3-212ENST00000466845 STILQ15468 1287 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 PTPN21Q16825 1174 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 HS1BP3Q53T59 392 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 MEX3CQ5U5Q3 659 aaKnown RBP6.12□□□□□ -1.43
LRCH3-212ENST00000466845 RAB12Q6IQ22 244 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 CORO6Q6QEF8 472 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 GPR155Q7Z3F1 870 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 LIMS2Q7Z4I7 341 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 TTC39CQ8N584 583 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 PPM1NQ8N819 430 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 PCSK9Q8NBP7 692 aaKnown RBP6.12□□□□□ -1.43
LRCH3-212ENST00000466845 BBOF1Q8ND07 529 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 PLBD2Q8NHP8 589 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 NOC3LQ8WTT2 800 aaKnown RBP6.12□□□□□ -1.43
LRCH3-212ENST00000466845 ARL8AQ96BM9 186 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 C8orf49Q96NF6 230 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 FSD1Q9BTV5 496 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 TARS2Q9BW92 718 aaKnown RBP6.12□□□□□ -1.43
LRCH3-212ENST00000466845 MYLK2Q9H1R3 596 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 ZNF644Q9H582 1327 aaPredicted RBP6.12□□□□□ -1.43
LRCH3-212ENST00000466845 CRLF2Q9HC73 371 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 SMURF1Q9HCE7 757 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 XAB2Q9HCS7 855 aaKnown RBP6.12□□□□□ -1.43
LRCH3-212ENST00000466845 SLC39A2Q9NP94 309 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 VPS45Q9NRW7 570 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 NSMCE4AQ9NXX6 385 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 RCAN3Q9UKA8 241 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 JAG2Q9Y219 1238 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 CAB39Q9Y376 341 aaPredicted RBP6.12□□□□□ -1.43
LRCH3-212ENST00000466845 ASB1Q9Y576 335 aa6.12□□□□□ -1.43
LRCH3-212ENST00000466845 ARHGEF5Q12774 1597 aa6.11□□□□□ -1.43
LRCH3-212ENST00000466845 MAP3K1Q13233 1512 aa6.11□□□□□ -1.43
LRCH3-212ENST00000466845 RTEL1-TNFRSF6BF6WH68 1400 aa6.11□□□□□ -1.43
LRCH3-212ENST00000466845 NINLQ9Y2I6 1382 aa6.11□□□□□ -1.43
LRCH3-212ENST00000466845 SLC12A8A0AV02 714 aa6.11□□□□□ -1.43
LRCH3-212ENST00000466845 PRAMEF25A6NGN4 478 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms