RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 CHRM1P11229 460 aaPredicted RBP22.01■■□□□ 1.11
COL6A1-203ENST00000466285 OPRD1P41143 372 aa22.01■■□□□ 1.11
COL6A1-203ENST00000466285 IFNAR2P48551 515 aa22.01■■□□□ 1.11
COL6A1-203ENST00000466285 CYP24A1Q07973 514 aa22.01■■□□□ 1.11
COL6A1-203ENST00000466285 MYO1EQ12965 1108 aa22.01■■□□□ 1.11
COL6A1-203ENST00000466285 ZNF507Q8TCN5 953 aa22.01■■□□□ 1.11
COL6A1-203ENST00000466285 CD101Q93033 1021 aa22.01■■□□□ 1.11
COL6A1-203ENST00000466285 CCDC127Q96BQ5 260 aa22.01■■□□□ 1.11
COL6A1-203ENST00000466285 MMS19Q96T76 1030 aa22.01■■□□□ 1.11
COL6A1-203ENST00000466285 CGRRF1Q99675 332 aa22.01■■□□□ 1.11
COL6A1-203ENST00000466285 RNF38Q9H0F5 515 aa22.01■■□□□ 1.11
COL6A1-203ENST00000466285 MAGEC2Q9UBF1 373 aaPredicted RBP22.01■■□□□ 1.11
COL6A1-203ENST00000466285 ARHGAP26Q9UNA1 814 aa22.01■■□□□ 1.11
COL6A1-203ENST00000466285 SLC8A2Q9UPR5 921 aa22.01■■□□□ 1.11
COL6A1-203ENST00000466285 TNRC6BQ9UPQ9 1833 aaKnown RBP22.01■■□□□ 1.11
COL6A1-203ENST00000466285 ZFHX4Q86UP3 3567 aa22■■□□□ 1.11
COL6A1-203ENST00000466285 SOBPA7XYQ1 873 aa22■■□□□ 1.11
COL6A1-203ENST00000466285 CLDN5O00501 218 aa22■■□□□ 1.11
COL6A1-203ENST00000466285 EIF3DO15371 548 aaKnown RBP eCLIP22■■□□□ 1.11
COL6A1-203ENST00000466285 ADRB1P08588 477 aa22■■□□□ 1.11
COL6A1-203ENST00000466285 SDHBP21912 280 aa22■■□□□ 1.11
COL6A1-203ENST00000466285 GRIK1P39086 918 aa22■■□□□ 1.11
COL6A1-203ENST00000466285 KCNB1Q14721 858 aa22■■□□□ 1.11
COL6A1-203ENST00000466285 DUOXA2Q1HG44 320 aa22■■□□□ 1.11
COL6A1-203ENST00000466285 TTLL2Q9BWV7 592 aa22■■□□□ 1.11
COL6A1-203ENST00000466285 ZSCAN16Q9H4T2 348 aaPredicted RBP22■■□□□ 1.11
COL6A1-203ENST00000466285 SMPD4Q9NXE4 827 aa22■■□□□ 1.11
COL6A1-203ENST00000466285 INVSQ9Y283 1065 aa22■■□□□ 1.11
COL6A1-203ENST00000466285 USP24Q9UPU5 2620 aa22■■□□□ 1.11
COL6A1-203ENST00000466285 LEFTY2O00292 366 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 PPP6R2O75170 966 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 KRT37O76014 449 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 CCDC192P0DO97 292 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 HNRNPLP14866 589 aaKnown RBP eCLIP21.99■■□□□ 1.11
COL6A1-203ENST00000466285 HDCP19113 662 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 DRD1P21728 446 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 KCNA4P22459 653 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 SEC13P55735 322 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 MYL6P60660 151 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 PKP1Q13835 747 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 DMC1Q14565 340 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 PSMD6Q15008 389 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 C4orf50Q6ZRC1 276 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 DPH6Q7L8W6 267 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 C12orf40Q86WS4 652 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 MYCBPAPQ8TBZ2 947 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 ATP2A3Q93084 1043 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 SPATA17Q96L03 361 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 XYLT2Q9H1B5 865 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 SMYD3Q9H7B4 428 aa21.99■■□□□ 1.11
COL6A1-203ENST00000466285 THADAQ6YHU6 1953 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 KIAA0391O15091 583 aaKnown RBP21.98■■□□□ 1.11
COL6A1-203ENST00000466285 CYP17A1P05093 508 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 IFRD2Q12894 506 aaPredicted RBP21.98■■□□□ 1.11
COL6A1-203ENST00000466285 PSMD2Q13200 908 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 CUL4BQ13620 913 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 PLK5Q496M5 336 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 PLA2G2CQ5R387 149 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 CNNM4Q6P4Q7 775 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 VSTM1Q6UX27 236 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 DENND5BQ6ZUT9 1274 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 CACNA2D4Q7Z3S7 1137 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 C7orf25Q9BPX7 421 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 B3GNT5Q9BYG0 378 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 BACH2Q9BYV9 841 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 TPSD1Q9BZJ3 242 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 SDCBP2Q9H190 292 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 DUSP15Q9H1R2 295 aaPredicted RBP21.98■■□□□ 1.11
COL6A1-203ENST00000466285 ZDHHC4Q9NPG8 344 aa21.98■■□□□ 1.11
COL6A1-203ENST00000466285 FRYQ5TBA9 3013 aa21.97■■□□□ 1.11
COL6A1-203ENST00000466285 ZNF840PA6NDX5 716 aa21.97■■□□□ 1.11
COL6A1-203ENST00000466285 K7EQS6 105 aa21.97■■□□□ 1.11
COL6A1-203ENST00000466285 CUTAO60888 179 aa21.97■■□□□ 1.11
COL6A1-203ENST00000466285 OLFM2O95897 454 aa21.97■■□□□ 1.11
COL6A1-203ENST00000466285 TCF3P15923 654 aa21.97■■□□□ 1.11
COL6A1-203ENST00000466285 TNNI1P19237 187 aa21.97■■□□□ 1.11
COL6A1-203ENST00000466285 MPLP40238 635 aa21.97■■□□□ 1.11
COL6A1-203ENST00000466285 AASDHQ4L235 1098 aaPredicted RBP21.97■■□□□ 1.11
COL6A1-203ENST00000466285 SYT13Q7L8C5 426 aa21.97■■□□□ 1.11
COL6A1-203ENST00000466285 HS2ST1Q7LGA3 356 aa21.97■■□□□ 1.11
COL6A1-203ENST00000466285 FILIP1Q7Z7B0 1213 aa21.97■■□□□ 1.11
COL6A1-203ENST00000466285 OR6B3Q8NGW1 331 aa21.97■■□□□ 1.11
COL6A1-203ENST00000466285 CHAMP1Q96JM3 812 aa21.97■■□□□ 1.11
COL6A1-203ENST00000466285 SLC39A2Q9NP94 309 aa21.97■■□□□ 1.11
COL6A1-203ENST00000466285 CPQQ9Y646 472 aa21.97■■□□□ 1.11
COL6A1-203ENST00000466285 MYH10P35580 1976 aa21.96■■□□□ 1.11
COL6A1-203ENST00000466285 CCDC163A0A0D9SF12 145 aa21.96■■□□□ 1.11
COL6A1-203ENST00000466285 POLR2DO15514 142 aaKnown RBP21.96■■□□□ 1.11
COL6A1-203ENST00000466285 ATG13O75143 517 aa21.96■■□□□ 1.11
COL6A1-203ENST00000466285 YEATS4O95619 227 aa21.96■■□□□ 1.11
COL6A1-203ENST00000466285 OAS1P00973 400 aaKnown RBP21.96■■□□□ 1.11
COL6A1-203ENST00000466285 BCKDHBP21953 392 aa21.96■■□□□ 1.11
COL6A1-203ENST00000466285 CDH8P55286 799 aa21.96■■□□□ 1.11
COL6A1-203ENST00000466285 TAF10Q12962 218 aa21.96■■□□□ 1.11
COL6A1-203ENST00000466285 SURF1Q15526 300 aa21.96■■□□□ 1.11
COL6A1-203ENST00000466285 SCARA5Q6ZMJ2 495 aa21.96■■□□□ 1.11
COL6A1-203ENST00000466285 STXBP4Q6ZWJ1 553 aa21.96■■□□□ 1.11
COL6A1-203ENST00000466285 UNC13DQ70J99 1090 aa21.96■■□□□ 1.11
COL6A1-203ENST00000466285 USP33Q8TEY7 942 aa21.96■■□□□ 1.11
COL6A1-203ENST00000466285 WBP2Q969T9 261 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms