RNA–Protein interactions for RNA: ENST00000461934.5

UBA3-205, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-205ENST00000461934 RESP18Q5W5W9 173 aa14.12□□□□□ -0.15
UBA3-205ENST00000461934 WDR5BQ86VZ2 330 aa14.12□□□□□ -0.15
UBA3-205ENST00000461934 CCDC26Q8TAB7 109 aa14.12□□□□□ -0.15
UBA3-205ENST00000461934 MYCBPAPQ8TBZ2 947 aa14.12□□□□□ -0.15
UBA3-205ENST00000461934 SH3RF2Q8TEC5 729 aa14.12□□□□□ -0.15
UBA3-205ENST00000461934 CCDC47Q96A33 483 aaKnown RBP14.12□□□□□ -0.15
UBA3-205ENST00000461934 PCED1BQ96HM7 432 aa14.12□□□□□ -0.15
UBA3-205ENST00000461934 SLITRK1Q96PX8 696 aa14.12□□□□□ -0.15
UBA3-205ENST00000461934 ELOVL4Q9GZR5 314 aa14.12□□□□□ -0.15
UBA3-205ENST00000461934 ECT2Q9H8V3 914 aa14.12□□□□□ -0.15
UBA3-205ENST00000461934 CRTAC1Q9NQ79 661 aa14.12□□□□□ -0.15
UBA3-205ENST00000461934 WNT6Q9Y6F9 365 aa14.12□□□□□ -0.15
UBA3-205ENST00000461934 EP300Q09472 2414 aaPredicted RBP14.12□□□□□ -0.15
UBA3-205ENST00000461934 DMDP11532 3685 aa14.12□□□□□ -0.15
UBA3-205ENST00000461934 MYO18AQ92614 2054 aaKnown RBP14.11□□□□□ -0.15
UBA3-205ENST00000461934 C2orf78A6NCI8 922 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 HRO43593 1189 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 LRP3O75074 770 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 RNF40O75150 1001 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 TACC1O75410 805 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 NFATC1O95644 943 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 FAM163BP0C2L3 166 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 GJA4P35212 333 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 GALK1P51570 392 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 AP3M2P53677 418 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 DMWDQ09019 674 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 USP4Q13107 963 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 SRSF5Q13243 272 aaKnown RBP14.11□□□□□ -0.15
UBA3-205ENST00000461934 CUL4BQ13620 913 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 ZNF77Q15935 545 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 ZNF667Q5HYK9 610 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 WDR44Q5JSH3 913 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 FSTL4Q6MZW2 842 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 C12orf56Q8IXR9 622 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 CD101Q93033 1021 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 MRPL45Q9BRJ2 306 aaKnown RBP14.11□□□□□ -0.15
UBA3-205ENST00000461934 MED10Q9BTT4 135 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 DLL3Q9NYJ7 618 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 SERTAD1Q9UHV2 236 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 DMXL1Q9Y485 3027 aa14.11□□□□□ -0.15
UBA3-205ENST00000461934 FRYLO94915 3013 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 ZNF292O60281 2723 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 F8VP50 259 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 FOXD2O60548 495 aaPredicted RBP14.1□□□□□ -0.15
UBA3-205ENST00000461934 EGFP01133 1207 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 P4HA1P13674 534 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 PTPN1P18031 435 aaKnown RBP14.1□□□□□ -0.15
UBA3-205ENST00000461934 MYL6P60660 151 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 DNM1Q05193 864 aaKnown RBP14.1□□□□□ -0.15
UBA3-205ENST00000461934 EHHADHQ08426 723 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 BMT2Q1RMZ1 405 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 ZNF699Q32M78 642 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 LIMS2Q7Z4I7 341 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 GRAMD1CQ8IYS0 662 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 ACDQ96AP0 544 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 SLC22A12Q96S37 553 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 RTKNQ9BST9 563 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 ARHGAP26Q9UNA1 814 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 GVINP1Q7Z2Y8 2422 aa14.1□□□□□ -0.15
UBA3-205ENST00000461934 OTOL1A6NHN0 477 aaPredicted RBP14.09□□□□□ -0.15
UBA3-205ENST00000461934 RPP40O75818 363 aaKnown RBP14.09□□□□□ -0.15
UBA3-205ENST00000461934 RTN3O95197 1032 aaPredicted RBP14.09□□□□□ -0.15
UBA3-205ENST00000461934 KIF20AO95235 890 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 STAU1O95793 577 aaKnown RBP14.09□□□□□ -0.15
UBA3-205ENST00000461934 SLFN14P0C7P3 912 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 HOXA6P31267 233 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 NOP14P78316 857 aaKnown RBP14.09□□□□□ -0.15
UBA3-205ENST00000461934 EML3Q32P44 896 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 SCARA5Q6ZMJ2 495 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 CACNA2D4Q7Z3S7 1137 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 DDX42Q86XP3 938 aaKnown RBP eCLIP14.09□□□□□ -0.15
UBA3-205ENST00000461934 CAMKK1Q8N5S9 505 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 FAM160A2Q8N612 972 aaPredicted RBP14.09□□□□□ -0.15
UBA3-205ENST00000461934 C12orf50Q8NA57 414 aaPredicted RBP14.09□□□□□ -0.15
UBA3-205ENST00000461934 B3GALNT2Q8NCR0 500 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 PDZD8Q8NEN9 1154 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 RPLP0P6Q8NHW5 317 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 RIN3Q8TB24 985 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 GAB3Q8WWW8 586 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 CHFRQ96EP1 664 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 TNIP3Q96KP6 325 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 SPATA32Q96LK8 384 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 C8orf48Q96LL4 319 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 DPEP3Q9H4B8 488 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 SEMA4GQ9NTN9 838 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 GCNT4Q9P109 453 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 USP25Q9UHP3 1055 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 FRMD4BQ9Y2L6 1034 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 PLXND1Q9Y4D7 1925 aa14.09□□□□□ -0.15
UBA3-205ENST00000461934 DCHS1Q96JQ0 3298 aa14.08□□□□□ -0.16
UBA3-205ENST00000461934 CCDC163A0A0D9SF12 145 aa14.08□□□□□ -0.16
UBA3-205ENST00000461934 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.08□□□□□ -0.16
UBA3-205ENST00000461934 MED19A0JLT2 244 aaPredicted RBP14.08□□□□□ -0.16
UBA3-205ENST00000461934 LEFTY2O00292 366 aa14.08□□□□□ -0.16
UBA3-205ENST00000461934 SLC9A3R1O14745 358 aaPredicted RBP14.08□□□□□ -0.16
UBA3-205ENST00000461934 AXIN1O15169 862 aa14.08□□□□□ -0.16
UBA3-205ENST00000461934 CALUO43852 315 aaPredicted RBP14.08□□□□□ -0.16
UBA3-205ENST00000461934 GABBR2O75899 941 aa14.08□□□□□ -0.16
UBA3-205ENST00000461934 MBL2P11226 248 aaPredicted RBP14.08□□□□□ -0.16
UBA3-205ENST00000461934 TCF3P15923 654 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms