RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 PAQR9Q6ZVX9 377 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 ITIH5Q86UX2 942 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 FAM71AQ8IYT1 594 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 FUKQ8N0W3 1084 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 ELMOD1Q8N336 334 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 C12orf76Q8N812 135 aaPredicted RBP10.54□□□□□ -0.72
VPS45-204ENST00000460366 LEMD2Q8NC56 503 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 RNF214Q8ND24 703 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 NEK11Q8NG66 645 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 ATXN2LQ8WWM7 1075 aaKnown RBP10.54□□□□□ -0.72
VPS45-204ENST00000460366 ZNF707Q96C28 371 aaPredicted RBP10.54□□□□□ -0.72
VPS45-204ENST00000460366 IQCDQ96DY2 449 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 CYFIP2Q96F07 1278 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 SMARCD1Q96GM5 515 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 SPATA17Q96L03 361 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 C8orf48Q96LL4 319 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 RIPOR3Q96MK2 946 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 EDEM3Q9BZQ6 932 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 GANQ9H2C0 597 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 CRISPLD1Q9H336 500 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 CSNK1G1Q9HCP0 422 aa10.54□□□□□ -0.72
VPS45-204ENST00000460366 H3BQ06 376 aaPredicted RBP10.53□□□□□ -0.72
VPS45-204ENST00000460366 RNF225M0QZC1 329 aaPredicted RBP10.53□□□□□ -0.72
VPS45-204ENST00000460366 FOXN3O00409 490 aaPredicted RBP10.53□□□□□ -0.72
VPS45-204ENST00000460366 MBTPS2O43462 519 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 CSH1P0DML2 217 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 CSH2P0DML3 217 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 BDNFP23560 247 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 PBX1P40424 430 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 MRPS5P82675 430 aaKnown RBP10.53□□□□□ -0.72
VPS45-204ENST00000460366 APBA1Q02410 837 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 DRAP1Q14919 205 aaPredicted RBP10.53□□□□□ -0.72
VPS45-204ENST00000460366 VEPH1Q14D04 833 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 CNGA2Q16280 664 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 MEA1Q16626 185 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 ARHGAP44Q17R89 818 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 SGO2Q562F6 1265 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 FIGNQ5HY92 759 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 SARM1Q6SZW1 724 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 TMC5Q6UXY8 1006 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 FAM35AQ86V20 835 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 GAS2L3Q86XJ1 694 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 FMNL3Q8IVF7 1028 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 TTC9BQ8N6N2 239 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 C12orf29Q8N999 325 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 RBBP8NLQ8NC74 664 aaPredicted RBP10.53□□□□□ -0.72
VPS45-204ENST00000460366 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.53□□□□□ -0.72
VPS45-204ENST00000460366 SMG7Q92540 1137 aaKnown RBP10.53□□□□□ -0.72
VPS45-204ENST00000460366 ZNF512Q96ME7 567 aaPredicted RBP10.53□□□□□ -0.72
VPS45-204ENST00000460366 PCMTD1Q96MG8 357 aaPredicted RBP10.53□□□□□ -0.72
VPS45-204ENST00000460366 SEPT5Q99719 369 aaPredicted RBP10.53□□□□□ -0.72
VPS45-204ENST00000460366 MED10Q9BTT4 135 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 NUP58Q9BVL2 599 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 UBXN6Q9BZV1 441 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 ZNF518BQ9C0D4 1074 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 RBSNQ9H1K0 784 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 PIDD1Q9HB75 910 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 WDR6Q9NNW5 1121 aaKnown RBP10.53□□□□□ -0.72
VPS45-204ENST00000460366 PNPLA8Q9NP80 782 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 PRDM9Q9NQV7 894 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 FAM207AQ9NSI2 230 aaPredicted RBP10.53□□□□□ -0.72
VPS45-204ENST00000460366 COMMD8Q9NX08 183 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 IFNKQ9P0W0 207 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 MYO6Q9UM54 1294 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 FHOD1Q9Y613 1164 aa10.53□□□□□ -0.72
VPS45-204ENST00000460366 O00370 1275 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 CLDN5O00501 218 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 CCL16O15467 120 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 MED7O43513 233 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 MICAL2O94851 1124 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 FGF19O95750 216 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 FAM200BP0CF97 657 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 KRT5P13647 590 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 CCDC130P13994 396 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 PTPN2P17706 415 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 ATF6P18850 670 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 ANXA13P27216 316 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 GRIK1P39086 918 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 KLK7P49862 253 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 EPHA5P54756 1037 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 POLR2FP61218 127 aaKnown RBP10.52□□□□□ -0.73
VPS45-204ENST00000460366 PTK2Q05397 1052 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 ORC1Q13415 861 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 SMAD2Q15796 467 aaKnown RBP10.52□□□□□ -0.73
VPS45-204ENST00000460366 CCDC142Q17RM4 750 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 PPP1R26Q5T8A7 1209 aaPredicted RBP10.52□□□□□ -0.73
VPS45-204ENST00000460366 LCLAT1Q6UWP7 414 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 LIAT1Q6ZQX7 453 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 DNAJB7Q7Z6W7 309 aaPredicted RBP10.52□□□□□ -0.73
VPS45-204ENST00000460366 ANKRD52Q8NB46 1076 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 SLC2A14Q8TDB8 520 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 PSMG2Q969U7 264 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 MYRFLQ96LU7 910 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 LPIN3Q9BQK8 851 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 DUSP16Q9BY84 665 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 GPR88Q9GZN0 384 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 DMAP1Q9NPF5 467 aaPredicted RBP10.52□□□□□ -0.73
VPS45-204ENST00000460366 PRDM6Q9NQX0 595 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 FAM49BQ9NUQ9 324 aa10.52□□□□□ -0.73
VPS45-204ENST00000460366 EHD2Q9NZN4 543 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms