RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 A0A087X0B3 334 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 LNP1A1A4G5 178 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 VPS37CA5D8V6 355 aaPredicted RBP13.25□□□□□ -0.29
TRA2B-206ENST00000456380 GIPC1O14908 333 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 NFATC1O95644 943 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 PDGFRBP09619 1106 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 MYO1EQ12965 1108 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 ALCAMQ13740 583 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 USP39Q53GS9 565 aaKnown RBP13.25□□□□□ -0.29
TRA2B-206ENST00000456380 C2orf27AQ580R0 203 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 PMS2CLQ68D20 193 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 FAM173BQ6P4H8 233 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 VSTM1Q6UX27 236 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 RASSF3Q86WH2 238 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 GPD1LQ8N335 351 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 ANKRD36BP1Q96IX9 119 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 RNF38Q9H0F5 515 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 PANK4Q9NVE7 773 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 ANAPC1Q9H1A4 1944 aa13.25□□□□□ -0.29
TRA2B-206ENST00000456380 LEFTY2O00292 366 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 GRIK1P39086 918 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 TXLNAP40222 546 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 CEBPZQ03701 1054 aaKnown RBP13.24□□□□□ -0.29
TRA2B-206ENST00000456380 MESP2Q0VG99 397 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 ANO7Q6IWH7 933 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 DENND5BQ6ZUT9 1274 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 SFTPA1Q8IWL2 248 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 ADGRG2Q8IZP9 1017 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 GLIS3Q8NEA6 775 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 CCDC26Q8TAB7 109 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 TTLL2Q9BWV7 592 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 TRPM5Q9NZQ8 1165 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 MMP17Q9ULZ9 603 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 DSPP15924 2871 aaKnown RBP13.24□□□□□ -0.29
TRA2B-206ENST00000456380 ZNF840PA6NDX5 716 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 ZNF233A6NK53 670 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 HNRNPLP14866 589 aaKnown RBP eCLIP13.24□□□□□ -0.29
TRA2B-206ENST00000456380 PFKLP17858 780 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 BCKDHBP21953 392 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 WARSP23381 471 aaKnown RBP13.24□□□□□ -0.29
TRA2B-206ENST00000456380 PDE6CP51160 858 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 NOVA1P51513 510 aaKnown RBP13.24□□□□□ -0.29
TRA2B-206ENST00000456380 CYP27A1Q02318 531 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 MAPRE1Q15691 268 aaKnown RBP13.24□□□□□ -0.29
TRA2B-206ENST00000456380 CRY1Q16526 586 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 DUOXA2Q1HG44 320 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 TMEM92Q6UXU6 159 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 CCDC73Q6ZRK6 1079 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 FILIP1Q7Z7B0 1213 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 CBWD2Q8IUF1 395 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 CCDC33Q8N5R6 958 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 MDGA1Q8NFP4 955 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 PCED1BQ96HM7 432 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 CNOT6LQ96LI5 555 aaKnown RBP13.24□□□□□ -0.29
TRA2B-206ENST00000456380 CEP295NLQ96MC4 621 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 R3HCC1Q9Y3T6 440 aaKnown RBP13.24□□□□□ -0.29
TRA2B-206ENST00000456380 NME7Q9Y5B8 376 aa13.24□□□□□ -0.29
TRA2B-206ENST00000456380 MYO16Q9Y6X6 1858 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 GON4LQ3T8J9 2241 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 PATE3B3GLJ2 98 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 CDX4O14627 284 aaPredicted RBP13.23□□□□□ -0.29
TRA2B-206ENST00000456380 KIAA0391O15091 583 aaKnown RBP13.23□□□□□ -0.29
TRA2B-206ENST00000456380 CST3P01034 146 aaPredicted RBP13.23□□□□□ -0.29
TRA2B-206ENST00000456380 TNNC2P02585 160 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 CYP17A1P05093 508 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 CHRM1P11229 460 aaPredicted RBP13.23□□□□□ -0.29
TRA2B-206ENST00000456380 HOXD13P35453 343 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 STAT6P42226 847 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 SLC6A11P48066 632 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 SLC7A9P82251 487 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 RESTQ13127 1097 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 CUL4AQ13619 759 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 DHCR24Q15392 516 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 DAB2IPQ5VWQ8 1189 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 C11orf74Q86VG3 221 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 MYCBPAPQ8TBZ2 947 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 HPS3Q969F9 1004 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 MMS19Q96T76 1030 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 CPQQ9Y646 472 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 ZFYVE26Q68DK2 2539 aa13.23□□□□□ -0.29
TRA2B-206ENST00000456380 FAM208BQ5VWN6 2430 aa13.22□□□□□ -0.29
TRA2B-206ENST00000456380 F8VP50 259 aa13.22□□□□□ -0.29
TRA2B-206ENST00000456380 SCAMP3O14828 347 aaKnown RBP13.22□□□□□ -0.29
TRA2B-206ENST00000456380 KHNYNO15037 678 aaKnown RBP13.22□□□□□ -0.29
TRA2B-206ENST00000456380 OLFM2O95897 454 aa13.22□□□□□ -0.29
TRA2B-206ENST00000456380 PROS1P07225 676 aa13.22□□□□□ -0.29
TRA2B-206ENST00000456380 ANXA13P27216 316 aa13.22□□□□□ -0.29
TRA2B-206ENST00000456380 CACNA2D1P54289 1103 aa13.22□□□□□ -0.29
TRA2B-206ENST00000456380 NOP14P78316 857 aaKnown RBP13.22□□□□□ -0.29
TRA2B-206ENST00000456380 IRX4P78413 519 aa13.22□□□□□ -0.29
TRA2B-206ENST00000456380 MDH1BQ5I0G3 518 aa13.22□□□□□ -0.29
TRA2B-206ENST00000456380 SH3PXD2AQ5TCZ1 1133 aa13.22□□□□□ -0.29
TRA2B-206ENST00000456380 TRAPPC11Q7Z392 1133 aa13.22□□□□□ -0.29
TRA2B-206ENST00000456380 OLIG1Q8TAK6 271 aa13.22□□□□□ -0.29
TRA2B-206ENST00000456380 C8orf48Q96LL4 319 aa13.22□□□□□ -0.29
TRA2B-206ENST00000456380 MRPL45Q9BRJ2 306 aaKnown RBP13.22□□□□□ -0.29
TRA2B-206ENST00000456380 TMEM30AQ9NV96 361 aa13.22□□□□□ -0.29
TRA2B-206ENST00000456380 SMPD4Q9NXE4 827 aa13.22□□□□□ -0.29
TRA2B-206ENST00000456380 HSPBP1Q9NZL4 362 aa13.22□□□□□ -0.29
TRA2B-206ENST00000456380 RALYQ9UKM9 306 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms