RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 FOXK2Q01167 660 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 GOLGA8FQ08AF8 430 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 GOLGA8DPQ0D2H9 430 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 TBX2Q13207 712 aaPredicted RBP16.63■□□□□ 0.25
VCX3B-204ENST00000453306 RAPGEF1Q13905 1077 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 LIN9Q5TKA1 542 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 GET4Q7L5D6 327 aaPredicted RBP16.63■□□□□ 0.25
VCX3B-204ENST00000453306 ENOSF1Q7L5Y1 443 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 RSAD2Q8WXG1 361 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 MYLPFQ96A32 169 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 ZNF518BQ9C0D4 1074 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 FAM49BQ9NUQ9 324 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 CEP72Q9P209 647 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 C2orf16Q68DN1 1984 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 CFAP54Q96N23 3096 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 CBFA2T2O43439 604 aa16.62■□□□□ 0.25
VCX3B-204ENST00000453306 HNRNPA1P09651 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
VCX3B-204ENST00000453306 KRT5P13647 590 aa16.62■□□□□ 0.25
VCX3B-204ENST00000453306 CPB1P15086 417 aa16.62■□□□□ 0.25
VCX3B-204ENST00000453306 ATF2P15336 505 aa16.62■□□□□ 0.25
VCX3B-204ENST00000453306 CYP2F1P24903 491 aa16.62■□□□□ 0.25
VCX3B-204ENST00000453306 BRD2P25440 801 aaKnown RBP16.62■□□□□ 0.25
VCX3B-204ENST00000453306 GPR15P49685 360 aa16.62■□□□□ 0.25
VCX3B-204ENST00000453306 ADCY1Q08828 1119 aa16.62■□□□□ 0.25
VCX3B-204ENST00000453306 DUSP4Q13115 394 aa16.62■□□□□ 0.25
VCX3B-204ENST00000453306 FIGNQ5HY92 759 aa16.62■□□□□ 0.25
VCX3B-204ENST00000453306 PPP1R26Q5T8A7 1209 aaPredicted RBP16.62■□□□□ 0.25
VCX3B-204ENST00000453306 OLIG1Q8TAK6 271 aa16.62■□□□□ 0.25
VCX3B-204ENST00000453306 HEXIM2Q96MH2 286 aaKnown RBP16.62■□□□□ 0.25
VCX3B-204ENST00000453306 OXCT2Q9BYC2 517 aaPredicted RBP16.62■□□□□ 0.25
VCX3B-204ENST00000453306 SEMA4AQ9H3S1 761 aa16.62■□□□□ 0.25
VCX3B-204ENST00000453306 FAM124BQ9H5Z6 455 aaPredicted RBP16.62■□□□□ 0.25
VCX3B-204ENST00000453306 AFF4Q9UHB7 1163 aaKnown RBP16.62■□□□□ 0.25
VCX3B-204ENST00000453306 FBXW11Q9UKB1 542 aa16.62■□□□□ 0.25
VCX3B-204ENST00000453306 CA14Q9ULX7 337 aa16.62■□□□□ 0.25
VCX3B-204ENST00000453306 ITIH6Q6UXX5 1313 aa16.62■□□□□ 0.25
VCX3B-204ENST00000453306 PLXNA3P51805 1871 aa16.61■□□□□ 0.25
VCX3B-204ENST00000453306 XYLBO75191 536 aa16.61■□□□□ 0.25
VCX3B-204ENST00000453306 BEST1O76090 585 aa16.61■□□□□ 0.25
VCX3B-204ENST00000453306 ADCY5O95622 1261 aa16.61■□□□□ 0.25
VCX3B-204ENST00000453306 FSHRP23945 695 aa16.61■□□□□ 0.25
VCX3B-204ENST00000453306 TSPY1Q01534 308 aa16.61■□□□□ 0.25
VCX3B-204ENST00000453306 TPGS2Q68CL5 300 aa16.61■□□□□ 0.25
VCX3B-204ENST00000453306 IRF2BP2Q7Z5L9 587 aa16.61■□□□□ 0.25
VCX3B-204ENST00000453306 SLC47A2Q86VL8 602 aa16.61■□□□□ 0.25
VCX3B-204ENST00000453306 DCP1BQ8IZD4 617 aaKnown RBP16.61■□□□□ 0.25
VCX3B-204ENST00000453306 ZMIZ2Q8NF64 920 aa16.61■□□□□ 0.25
VCX3B-204ENST00000453306 SLC2A14Q8TDB8 520 aa16.61■□□□□ 0.25
VCX3B-204ENST00000453306 CPLX3Q8WVH0 158 aa16.61■□□□□ 0.25
VCX3B-204ENST00000453306 CYFIP2Q96F07 1278 aa16.61■□□□□ 0.25
VCX3B-204ENST00000453306 MRFAP1L1Q96HT8 127 aa16.61■□□□□ 0.25
VCX3B-204ENST00000453306 GRPEL1Q9HAV7 217 aa16.61■□□□□ 0.25
VCX3B-204ENST00000453306 RIF1Q5UIP0 2472 aaKnown RBP16.6■□□□□ 0.25
VCX3B-204ENST00000453306 KRBA1A5PL33 1030 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 ANHXE9PGG2 379 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 O00370 1275 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 GABBR2O75899 941 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 GFPT2O94808 682 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 PAEPP09466 180 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 HAPLN1P10915 354 aaPredicted RBP16.6■□□□□ 0.25
VCX3B-204ENST00000453306 BDNFP23560 247 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 HOXA9P31269 272 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 SOX5P35711 763 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 USP8P40818 1118 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 PPM1LQ5SGD2 360 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 SDHAF4Q5VUM1 108 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 ARHGAP17Q68EM7 881 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 SPECC1LQ69YQ0 1117 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 TTC30AQ86WT1 665 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 TCEAL8Q8IYN2 117 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 TTC39CQ8N584 583 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 STKLD1Q8NE28 680 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 DDX1Q92499 740 aaKnown RBP16.6■□□□□ 0.25
VCX3B-204ENST00000453306 SHDQ96IW2 340 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 TNIP3Q96KP6 325 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 KCNK16Q96T55 309 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 HNRNPABQ99729 332 aaKnown RBP16.6■□□□□ 0.25
VCX3B-204ENST00000453306 TBC1D17Q9HA65 648 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 SLC2A4RGQ9NR83 387 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 ABI2Q9NYB9 513 aaPredicted RBP16.6■□□□□ 0.25
VCX3B-204ENST00000453306 CAPN11Q9UMQ6 739 aa16.6■□□□□ 0.25
VCX3B-204ENST00000453306 MYO15AQ9UKN7 3530 aa16.59■□□□□ 0.25
VCX3B-204ENST00000453306 LRRC53A6NM62 1247 aa16.59■□□□□ 0.25
VCX3B-204ENST00000453306 TULP2O00295 520 aa16.59■□□□□ 0.25
VCX3B-204ENST00000453306 NRG2O14511 850 aaPredicted RBP16.59■□□□□ 0.25
VCX3B-204ENST00000453306 VDRP11473 427 aa16.59■□□□□ 0.25
VCX3B-204ENST00000453306 CHRNB2P17787 502 aa16.59■□□□□ 0.25
VCX3B-204ENST00000453306 ATF6P18850 670 aa16.59■□□□□ 0.25
VCX3B-204ENST00000453306 TRIM21P19474 475 aaKnown RBP16.59■□□□□ 0.25
VCX3B-204ENST00000453306 ADORA2BP29275 332 aa16.59■□□□□ 0.25
VCX3B-204ENST00000453306 CASP14P31944 242 aa16.59■□□□□ 0.25
VCX3B-204ENST00000453306 YWHAEP62258 255 aaKnown RBP16.59■□□□□ 0.25
VCX3B-204ENST00000453306 CYP27A1Q02318 531 aa16.59■□□□□ 0.25
VCX3B-204ENST00000453306 HTR4Q13639 388 aa16.59■□□□□ 0.25
VCX3B-204ENST00000453306 PKDCCQ504Y2 493 aa16.59■□□□□ 0.25
VCX3B-204ENST00000453306 MTSS1LQ765P7 747 aa16.59■□□□□ 0.25
VCX3B-204ENST00000453306 RTL10Q7L3V2 364 aa16.59■□□□□ 0.25
VCX3B-204ENST00000453306 GRASPQ7Z6J2 395 aaPredicted RBP16.59■□□□□ 0.25
VCX3B-204ENST00000453306 NOP9Q86U38 636 aaKnown RBP16.59■□□□□ 0.25
VCX3B-204ENST00000453306 FAM35AQ86V20 835 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms