RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 TMX3Q96JJ7 454 aa12.41□□□□□ -0.42
CHRNA1-207ENST00000435083 SYT15Q9BQS2 421 aa12.41□□□□□ -0.42
CHRNA1-207ENST00000435083 STRA6Q9BX79 667 aa12.41□□□□□ -0.42
CHRNA1-207ENST00000435083 NUSAP1Q9BXS6 441 aaKnown RBP12.41□□□□□ -0.42
CHRNA1-207ENST00000435083 PCIF1Q9H4Z3 704 aa12.41□□□□□ -0.42
CHRNA1-207ENST00000435083 PDE11AQ9HCR9 933 aa12.41□□□□□ -0.42
CHRNA1-207ENST00000435083 SEL1LQ9UBV2 794 aa12.41□□□□□ -0.42
CHRNA1-207ENST00000435083 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 SCAMP3O14828 347 aaKnown RBP12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 ABL1P00519 1130 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 CYP17A1P05093 508 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 HNRNPLP14866 589 aaKnown RBP eCLIP12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 GAP43P17677 238 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 GARTP22102 1010 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 LMO2P25791 158 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 ANXA13P27216 316 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 TIE1P35590 1138 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 MAPK8P45983 427 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 SLC6A11P48066 632 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 CYP27A1Q02318 531 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 MYO1EQ12965 1108 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 MAPK8IP2Q13387 824 aaPredicted RBP12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 COL9A2Q14055 689 aaPredicted RBP12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 GAB4Q2WGN9 574 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 TRIM61Q5EBN2 209 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 EMC10Q5UCC4 262 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 LARP1BQ659C4 914 aaKnown RBP12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 LMBRD2Q68DH5 695 aaPredicted RBP12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 KIAA1211LQ6NV74 962 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 USP49Q70CQ1 688 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 TMEFF1Q8IYR6 380 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 TXNDC5Q8NBS9 432 aaKnown RBP12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 OLIG1Q8TAK6 271 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 CXorf38Q8TB03 319 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 MYLPFQ96A32 169 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 SPACA7Q96KW9 195 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 SPATA17Q96L03 361 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 PNKPQ96T60 521 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 TMEM121BQ9BXQ6 578 aaPredicted RBP12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 MTMR12Q9C0I1 747 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 SMPD4Q9NXE4 827 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 BCCIPQ9P287 314 aaKnown RBP eCLIP12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 CCDC39Q9UFE4 941 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 SIX4Q9UIU6 781 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 CDH9Q9ULB4 789 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 SMC3Q9UQE7 1217 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 PCDHB13Q9Y5F0 798 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 CHD6Q8TD26 2715 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 CACNA1GO43497 2377 aa12.4□□□□□ -0.42
CHRNA1-207ENST00000435083 CFAP47Q6ZTR5 3102 aa12.4□□□□□ -0.43
CHRNA1-207ENST00000435083 TMEM8BA6NDV4 472 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 APODP05090 189 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 PDGFRBP09619 1106 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 IDEP14735 1019 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 P2RY2P41231 377 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 USP46P62068 366 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 LMAN2Q12907 356 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 DHCR24Q15392 516 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 VSTM1Q6UX27 236 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 DENND5BQ6ZUT9 1274 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 SV2BQ7L1I2 683 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 DPH6Q7L8W6 267 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 SFTPA1Q8IWL2 248 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 ADGRG2Q8IZP9 1017 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 PGBD3Q8N328 593 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 FRMD1Q8N878 549 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 IL17RCQ8NAC3 791 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 WHAMMQ8TF30 809 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 GATA6Q92908 595 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 HPDLQ96IR7 371 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 ANKRD36BP1Q96IX9 119 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 CBWD1Q9BRT8 395 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 RNF38Q9H0F5 515 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 SLC32A1Q9H598 525 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 POLMQ9NP87 494 aaPredicted RBP12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 STK17AQ9UEE5 414 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 EVLQ9UI08 416 aaPredicted RBP12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 CPQQ9Y646 472 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 PTPRDP23468 1912 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 SGK1O00141 431 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 SLC9A3R1O14745 358 aaPredicted RBP12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 TNFRSF10BO14763 440 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 KAT7O95251 611 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 HOXB3P14651 431 aaPredicted RBP12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 ENGP17813 658 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 PFKLP17858 780 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 CASP5P51878 434 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 MESP2Q0VG99 397 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 RESTQ13127 1097 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 RABEP1Q15276 862 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 MAPRE1Q15691 268 aaKnown RBP12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 EOGTQ5NDL2 527 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 RRAGBQ5VZM2 374 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 BRAPQ7Z569 592 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 SYT12Q8IV01 421 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 KBTBD7Q8WVZ9 684 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 HMGB4Q8WW32 186 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 DNAJC19Q96DA6 116 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 FNBP1Q96RU3 617 aa12.39□□□□□ -0.43
CHRNA1-207ENST00000435083 ZDHHC4Q9NPG8 344 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms