RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 NLRX1Q86UT6 975 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 SEPT9Q9UHD8 586 aaPredicted RBP12.2□□□□□ -0.46
DDR1-232ENST00000418800 PHF24Q9UPV7 400 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 TJP1Q07157 1748 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 C15orf38-AP3S2A0A0A6YYH1 394 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 SORBS2O94875 1100 aaKnown RBP12.2□□□□□ -0.46
DDR1-232ENST00000418800 PROSCO94903 275 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 ASLP04424 464 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 ELK3P41970 407 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 PDE1BQ01064 536 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 TRMT5Q32P41 509 aaKnown RBP12.2□□□□□ -0.46
DDR1-232ENST00000418800 TXNRD3NBQ6F5E7 133 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 KRT80Q6KB66 452 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 C16orf46Q6P387 395 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 ARPINQ7Z6K5 226 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 NDUFAF2Q8N183 169 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 TUFT1Q9NNX1 390 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 RAB6BQ9NRW1 208 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 TXNDC16Q9P2K2 825 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 VAV3Q9UKW4 847 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 NUMBLQ9Y6R0 609 aa12.2□□□□□ -0.46
DDR1-232ENST00000418800 AIM2O14862 343 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 GLRA2P23416 452 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 PSMC5P62195 406 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 TFAMQ00059 246 aaKnown RBP12.19□□□□□ -0.46
DDR1-232ENST00000418800 TRPC3Q13507 836 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 DCTN2Q13561 401 aaKnown RBP12.19□□□□□ -0.46
DDR1-232ENST00000418800 SIX1Q15475 284 aaPredicted RBP12.19□□□□□ -0.46
DDR1-232ENST00000418800 OASLQ15646 514 aaKnown RBP12.19□□□□□ -0.46
DDR1-232ENST00000418800 GSTA3Q16772 222 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 EFHC1Q5JVL4 640 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 B3GNT6Q6ZMB0 384 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 CDR2LQ86X02 465 aaPredicted RBP12.19□□□□□ -0.46
DDR1-232ENST00000418800 TRIM50Q86XT4 487 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 ZCCHC9Q8N567 271 aaKnown RBP12.19□□□□□ -0.46
DDR1-232ENST00000418800 SHKBP1Q8TBC3 707 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 PANX3Q96QZ0 392 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 Q9H521 79 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 KCNH7Q9NS40 1196 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 SENP1Q9P0U3 644 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 NOCTQ9UK39 431 aaKnown RBP12.19□□□□□ -0.46
DDR1-232ENST00000418800 FRMPD4Q14CM0 1322 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 NEMP1O14524 444 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 TBX3O15119 743 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 RPS6KA4O75676 772 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 HLA-DRAP01903 254 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 RBP3P10745 1247 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 QARSP47897 775 aaKnown RBP12.19□□□□□ -0.46
DDR1-232ENST00000418800 NAA20P61599 178 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 KRT81Q14533 505 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 TMEM63BQ5T3F8 832 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 PRR5LQ6MZQ0 368 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 PPP1R2P3Q6NXS1 205 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 LENG9Q96B70 501 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 CYP1A2P05177 515 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 MMP10P09238 476 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 SERPINB8P50452 374 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 FOLH1Q04609 750 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 LSAMPQ13449 338 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 CC2D2BQ6DHV5 1058 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 DEFB107AQ8IZN7 70 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 E2F7Q96AV8 911 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 MMP19Q99542 508 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 CCT7Q99832 543 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 PCDHB2Q9Y5E7 798 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 STK24Q9Y6E0 443 aa12.19□□□□□ -0.46
DDR1-232ENST00000418800 COL14A1Q05707 1796 aaKnown RBP12.18□□□□□ -0.46
DDR1-232ENST00000418800 ARHGAP10A1A4S6 786 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 CCDC78A2IDD5 438 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 NDC80O14777 642 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 ZNF862O60290 1169 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 P4HBP07237 508 aaKnown RBP12.18□□□□□ -0.46
DDR1-232ENST00000418800 SRGAP2CP0DJJ0 459 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 SRGAP2BP0DMP2 458 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 FDX1P10109 184 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 IVDP26440 423 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 RGS2P41220 211 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 TMED10P49755 219 aaKnown RBP12.18□□□□□ -0.46
DDR1-232ENST00000418800 CHN2P52757 468 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 EIF3EP60228 445 aaKnown RBP12.18□□□□□ -0.46
DDR1-232ENST00000418800 CCDC92Q53HC0 331 aaPredicted RBP12.18□□□□□ -0.46
DDR1-232ENST00000418800 SYDE1Q6ZW31 735 aaPredicted RBP12.18□□□□□ -0.46
DDR1-232ENST00000418800 PTAR1Q7Z6K3 402 aaPredicted RBP12.18□□□□□ -0.46
DDR1-232ENST00000418800 DHDDSQ86SQ9 333 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 TREML1Q86YW5 311 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 PSPC1Q8WXF1 523 aaKnown RBP12.18□□□□□ -0.46
DDR1-232ENST00000418800 PPWD1Q96BP3 646 aaKnown RBP12.18□□□□□ -0.46
DDR1-232ENST00000418800 WWP1Q9H0M0 922 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 SMYD2Q9NRG4 433 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 SYNJ2BP-COX16A0A087WUM0 186 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 MCF2LO15068 1137 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 TOP3BO95985 862 aaKnown RBP12.18□□□□□ -0.46
DDR1-232ENST00000418800 GTF2H1P32780 548 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 DSG3P32926 999 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 CENPCQ03188 943 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 AOC3Q16853 763 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 KLHL38Q2WGJ6 581 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 FNBP1LQ5T0N5 605 aa12.18□□□□□ -0.46
DDR1-232ENST00000418800 C16orf87Q6PH81 154 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms