RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PLIN4Q96Q06 1357 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 SF3B1O75533 1304 aaKnown RBP eCLIP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 H3BNX3 289 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 IPO5O00410 1097 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 SLITRK3O94933 977 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 ALDH2P05091 517 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 C6orf222P0C671 652 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 SERPINB6P35237 376 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 VCPP55072 806 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 PDCD4Q53EL6 469 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 PPM1KQ8N3J5 372 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 DQX1Q8TE96 717 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 DCUN1D1Q96GG9 259 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 SERAC1Q96JX3 654 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 NLRP4Q96MN2 994 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 TSPYL2Q9H2G4 693 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 FAF1Q9UNN5 650 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 TMEM247A6NEH6 219 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 ADCY3O60266 1144 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 ALOX15P16050 662 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 AQP5P55064 265 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 MFAP3P55082 362 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 TAS2R40P59535 323 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 BST1Q10588 318 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 MTMR2Q13614 643 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 UBAP2LQ14157 1087 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 RABGAP1LQ5R372 815 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 PACS1Q6VY07 963 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 TTC13Q8NBP0 860 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 CELF1Q92879 486 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 FAM20AQ96MK3 541 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 BIRC8Q96P09 236 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 MPHOSPH6Q99547 160 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 EIF2AK1Q9BQI3 630 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 VAV3Q9UKW4 847 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 NR2E3Q9Y5X4 410 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 IQANK1A0A1B0GTG1 560 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 H3BSA7 217 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 SERPINB7O75635 380 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 CD58P19256 250 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 ALDH1A3P47895 512 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 GSTO1P78417 241 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 CCDC80Q76M96 950 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 KBTBD6Q86V97 674 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 MCOLN2Q8IZK6 566 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 C17orf50Q8WW18 174 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 ACAP3Q96P50 834 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 PRPF18Q99633 342 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 PADI4Q9UM07 663 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 POMPQ9Y244 141 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 FARP1Q9Y4F1 1045 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 ZNF536O15090 1300 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 IRS2Q9Y4H2 1338 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 GOLGA8SH3BPF8 625 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 GOLGA8MH3BSY2 632 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 PMM2O15305 246 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 DKC1O60832 514 aaKnown RBP eCLIP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 CRTAMO95727 393 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 EPHB1P54762 984 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 RALGPS1Q5JS13 557 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 TTBK2Q6IQ55 1244 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 SMIM5Q71RC9 77 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 RTKN2Q8IZC4 609 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 ACTRT2Q8TDY3 377 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 VPS50Q96JG6 964 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 WDR83Q9BRX9 315 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 PLGRKTQ9HBL7 147 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 CDH22Q9UJ99 828 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 ZNF180Q9UJW8 692 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 DRG1Q9Y295 367 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 TMED5Q9Y3A6 229 aa8.37□□□□□ -1.07
HMGXB4-202ENST00000418170 SDR42E2A6NKP2 422 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 USP17L10C9JJH3 530 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 SRGAP2CP0DJJ0 459 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 SRGAP2BP0DMP2 458 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 UNGP13051 313 aaPredicted RBP8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 MXI1P50539 228 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 VPS72Q15906 364 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 CNGA3Q16281 694 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 MSS51Q4VC12 460 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 ATG16L1Q676U5 607 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 ISLR2Q6UXK2 745 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 RILPQ96NA2 401 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 STRA6Q9BX79 667 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 PCDH9Q9HC56 1237 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 C6orf203Q9P0P8 240 aaPredicted RBP8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 RSL24D1Q9UHA3 163 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 APPL1Q9UKG1 709 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 EFR3BQ9Y2G0 817 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 HTR3EA5X5Y0 456 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 SORBS2O94875 1100 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 POLR2MP0CAP2 368 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 RAB15P59190 212 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 TMPRSS15P98073 1019 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 PFKPQ01813 784 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 RELAQ04206 551 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 NFX1Q12986 1120 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 PTK7Q13308 1070 aa8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 OASLQ15646 514 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-202ENST00000418170 ODR4Q5SWX8 454 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms