RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 PMF1Q6P1K2 205 aa12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 ZNF572Q7Z3I7 529 aaPredicted RBP12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 RHOT1Q8IXI2 618 aa12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 TDHQ8IZJ6 230 aa12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 FUKQ8N0W3 1084 aa12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 LRRN4CLQ8ND94 238 aa12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 MYCBPAPQ8TBZ2 947 aa12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 FNIP1Q8TF40 1166 aa12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 MYLPFQ96A32 169 aa12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 TRIM43Q96BQ3 446 aaPredicted RBP12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 SMARCD1Q96GM5 515 aa12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 NAP1L3Q99457 506 aaPredicted RBP12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 B3GNT5Q9BYG0 378 aa12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 TRIM7Q9C029 511 aa12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 LRRC4Q9HBW1 653 aa12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 KRT82Q9NSB4 513 aa12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 V9GYY5 206 aaPredicted RBP12.23□□□□□ -0.45
SNRNP35-202ENST00000412157 MYBPHLA2RUH7 354 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 F8W810 466 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 TULP2O00295 520 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 PIK3R2O00459 728 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 CLDN5O00501 218 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 BAIAP3O94812 1187 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 LCP1P13796 627 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 GPD1P21695 349 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 SCNN1AP37088 669 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 SLC6A3Q01959 620 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 ITIH3Q06033 890 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 C2orf54Q08AI8 447 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 SPOUT1Q5T280 376 aaKnown RBP12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 KIAA0319Q5VV43 1072 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 ZNF280DQ6N043 979 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 FUT10Q6P4F1 479 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 C4orf50Q6ZRC1 276 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 RSRC2Q7L4I2 434 aaKnown RBP12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 TMEM110Q86TL2 294 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 DCP1BQ8IZD4 617 aaKnown RBP12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 CRIPAKQ8N1N5 446 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 NIPA2Q8N8Q9 360 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 JOSD2Q8TAC2 188 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 ACTRT1Q8TDG2 376 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 KRT35Q92764 455 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 CD101Q93033 1021 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 PCED1BQ96HM7 432 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 MS4A14Q96JA4 679 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 RTP3Q9BQQ7 232 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 PCDHA3Q9Y5H8 950 aa12.22□□□□□ -0.45
SNRNP35-202ENST00000412157 CARNS1A5YM72 827 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 PDE2AO00408 941 aaPredicted RBP12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 DGKIO75912 1065 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 RNF8O76064 485 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 RFC1P35251 1148 aaPredicted RBP12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 GJC1P36383 396 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 CETN2P41208 172 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 MARCKSL1P49006 195 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 BCAR1P56945 870 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 PPIGQ13427 754 aaKnown RBP eCLIP12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 ACAP1Q15027 740 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 ELF2Q15723 593 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 HADHQ16836 314 aaKnown RBP12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 CCDC142Q17RM4 750 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 ERCC6LQ2NKX8 1250 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 ODF2Q5BJF6 829 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 ZFYVE27Q5T4F4 411 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 FAM171A1Q5VUB5 890 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 GPR153Q6NV75 609 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 CC2D1AQ6P1N0 951 aaPredicted RBP12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 FAM171BQ6P995 826 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 OLFML1Q6UWY5 402 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 CLEC20AQ6ZU45 233 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 PIGZQ86VD9 579 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 CPNE8Q86YQ8 564 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 SPATA2LQ8IUW3 424 aaPredicted RBP12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 SIX6OS1Q8N1H7 587 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 RASGEF1CQ8N431 466 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 SPATA4Q8NEY3 305 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 KCTD13Q8WZ19 329 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 ALG3Q92685 438 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 RNPC3Q96LT9 517 aaKnown RBP12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 IL23AQ9NPF7 189 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 ASNSD1Q9NWL6 643 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 MARCH5Q9NX47 278 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 EHD2Q9NZN4 543 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 COL4A6Q14031 1691 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 LAMA3Q16787 3333 aa12.21□□□□□ -0.45
SNRNP35-202ENST00000412157 GOLGA6L10A0A0M3HER8 536 aa12.2□□□□□ -0.46
SNRNP35-202ENST00000412157 OR6C75A6NL08 312 aa12.2□□□□□ -0.46
SNRNP35-202ENST00000412157 CCDC188H7C350 402 aa12.2□□□□□ -0.46
SNRNP35-202ENST00000412157 H7C4K7 107 aa12.2□□□□□ -0.46
SNRNP35-202ENST00000412157 PAPSS1O43252 624 aaPredicted RBP12.2□□□□□ -0.46
SNRNP35-202ENST00000412157 FBXO21O94952 628 aa12.2□□□□□ -0.46
SNRNP35-202ENST00000412157 OAZ2O95190 189 aa12.2□□□□□ -0.46
SNRNP35-202ENST00000412157 GALTP07902 379 aa12.2□□□□□ -0.46
SNRNP35-202ENST00000412157 RPL34P49207 117 aaKnown RBP12.2□□□□□ -0.46
SNRNP35-202ENST00000412157 ALDH7A1P49419 539 aaKnown RBP12.2□□□□□ -0.46
SNRNP35-202ENST00000412157 MAP3K7CLP57077 242 aa12.2□□□□□ -0.46
SNRNP35-202ENST00000412157 RNASE9P60153 205 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms