RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 FAM161BQ96MY7 647 aa16.09■□□□□ 0.17
LSM5-207ENST00000410044 GUCD1Q96NT3 240 aa16.09■□□□□ 0.17
LSM5-207ENST00000410044 CHP1Q99653 195 aa16.09■□□□□ 0.17
LSM5-207ENST00000410044 KRT82Q9NSB4 513 aa16.09■□□□□ 0.17
LSM5-207ENST00000410044 COMMD8Q9NX08 183 aa16.09■□□□□ 0.17
LSM5-207ENST00000410044 ZDHHC7Q9NXF8 308 aa16.09■□□□□ 0.17
LSM5-207ENST00000410044 IL37Q9NZH6 218 aa16.09■□□□□ 0.17
LSM5-207ENST00000410044 ASB3Q9Y575 518 aa16.09■□□□□ 0.17
LSM5-207ENST00000410044 INSL5Q9Y5Q6 135 aa16.09■□□□□ 0.17
LSM5-207ENST00000410044 PATJQ8NI35 1801 aa16.08■□□□□ 0.17
LSM5-207ENST00000410044 F8VP50 259 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 M0QYV0 167 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 DDX3XO00571 662 aaKnown RBP eCLIP16.08■□□□□ 0.162e-12■■■■□ 20.9
LSM5-207ENST00000410044 PRRG1O14668 218 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 TNFRSF10BO14763 440 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 C8AP07357 584 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 PLEKP08567 350 aaPredicted RBP16.08■□□□□ 0.16
LSM5-207ENST00000410044 HNRNPA1P09651 372 aaKnown RBP eCLIP16.08■□□□□ 0.16
LSM5-207ENST00000410044 ATF6P18850 670 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 IGFBP4P22692 258 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 GTF2F1P35269 517 aaKnown RBP eCLIP16.08■□□□□ 0.16
LSM5-207ENST00000410044 EIF4A3P38919 411 aaKnown RBP16.08■□□□□ 0.16
LSM5-207ENST00000410044 ALDH1A3P47895 512 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 MAP3K7CLP57077 242 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 NOMO3P69849 1222 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 PLD1Q13393 1074 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 DDR2Q16832 855 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 RAB41Q5JT25 222 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 CYP26C1Q6V0L0 522 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 TMEM110Q86TL2 294 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 TMTC1Q8IUR5 882 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 GPIHBP1Q8IV16 184 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 TMEM35BQ8NCS4 154 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 CMASQ8NFW8 434 aaPredicted RBP16.08■□□□□ 0.16
LSM5-207ENST00000410044 SECISBP2LQ93073 1101 aaKnown RBP16.08■□□□□ 0.16
LSM5-207ENST00000410044 SLC4A5Q9BY07 1137 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 MAN1C1Q9NR34 630 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 YIPF1Q9Y548 306 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 CEP83Q9Y592 693 aa16.08■□□□□ 0.16
LSM5-207ENST00000410044 GLP2RO95838 553 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 SSTR3P32745 418 aaPredicted RBP16.07■□□□□ 0.16
LSM5-207ENST00000410044 CDR1P51861 262 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 CCDC173Q0VFZ6 552 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 CLEC16AQ2KHT3 1053 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 TDRD12Q587J7 1177 aaKnown RBP16.07■□□□□ 0.16
LSM5-207ENST00000410044 LIN9Q5TKA1 542 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 PPP1R2P3Q6NXS1 205 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 PMF1Q6P1K2 205 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 PIGZQ86VD9 579 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 VPS36Q86VN1 386 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 TMEM139Q8IV31 216 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 SCN4BQ8IWT1 228 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 LRRC8AQ8IWT6 810 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 CCDC170Q8IYT3 715 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 NUP93Q8N1F7 819 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 SCML4Q8N228 414 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 SLC7A14Q8TBB6 771 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 MYLIPQ8WY64 445 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 SEPT5Q99719 369 aaPredicted RBP16.07■□□□□ 0.16
LSM5-207ENST00000410044 PDCL3Q9H2J4 239 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 NHEJ1Q9H9Q4 299 aaPredicted RBP16.07■□□□□ 0.16
LSM5-207ENST00000410044 DZANK1Q9NVP4 752 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 ADAMTS1Q9UHI8 967 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 CYTH4Q9UIA0 394 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 NENFQ9UMX5 172 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 USP3Q9Y6I4 520 aa16.07■□□□□ 0.16
LSM5-207ENST00000410044 ZNF638Q14966 1978 aaKnown RBP16.06■□□□□ 0.16
LSM5-207ENST00000410044 FAM92AA1XBS5 289 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 TULP2O00295 520 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 GABBR2O75899 941 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 SOAT2O75908 522 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 CSH1P0DML2 217 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 CSH2P0DML3 217 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 SRGAP2BP0DMP2 458 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 HOXB8P17481 243 aaPredicted RBP16.06■□□□□ 0.16
LSM5-207ENST00000410044 ACADSBP45954 432 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 GABRB2P47870 512 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 GPR15P49685 360 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 KIF11P52732 1056 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 EPHB3P54753 998 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 CENPCQ03188 943 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 TWF1Q12792 350 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 PPM1LQ5SGD2 360 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 ACAD10Q6JQN1 1059 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 PHF13Q86YI8 300 aaPredicted RBP16.06■□□□□ 0.16
LSM5-207ENST00000410044 VCPIP1Q96JH7 1222 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 MYRFLQ96LU7 910 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 CCDC42Q96M95 316 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 NOX5Q96PH1 765 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 BAG1Q99933 345 aaPredicted RBP16.06■□□□□ 0.16
LSM5-207ENST00000410044 TTLL2Q9BWV7 592 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 PRKD2Q9BZL6 878 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 ISCUQ9H1K1 167 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 IGFLR1Q9H665 355 aa16.06■□□□□ 0.16
LSM5-207ENST00000410044 A0A087X0T9 212 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 SLC38A8A6NNN8 435 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 RTN3O95197 1032 aaPredicted RBP16.05■□□□□ 0.16
LSM5-207ENST00000410044 LCA5LO95447 670 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 LRG1P02750 347 aa16.05■□□□□ 0.16
LSM5-207ENST00000410044 FAM228BP0C875 321 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms