RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 AGAP1Q9UPQ3 857 aa7.91□□□□□ -1.14
CXCR4-202ENST00000409817 MGAMO43451 1857 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 SERTM1A2A2V5 107 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 NDC80O14777 642 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 TNPO2O14787 897 aaKnown RBP7.9□□□□□ -1.14
CXCR4-202ENST00000409817 MEFVO15553 781 aaPredicted RBP7.9□□□□□ -1.14
CXCR4-202ENST00000409817 PPFIA2O75334 1257 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 GAS8O95995 478 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 CD4P01730 458 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 AKR1A1P14550 325 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 HOXA11P31270 313 aaPredicted RBP7.9□□□□□ -1.14
CXCR4-202ENST00000409817 HOXC8P31273 242 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 GABRB2P47870 512 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 GUCY2FP51841 1108 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 RELBQ01201 579 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 CAV1Q03135 178 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 KLF1Q13351 362 aaPredicted RBP7.9□□□□□ -1.14
CXCR4-202ENST00000409817 CCNG2Q16589 344 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 KIZQ2M2Z5 673 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 ZNF394Q53GI3 561 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 TAF2Q6P1X5 1199 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 SCARA5Q6ZMJ2 495 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 RUFY4Q6ZNE9 571 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 ZNF771Q7L3S4 317 aaPredicted RBP7.9□□□□□ -1.14
CXCR4-202ENST00000409817 TMC3Q7Z5M5 1100 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 WDTC1Q8N5D0 677 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 SLC4A11Q8NBS3 891 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 CCHCR1Q8TD31 782 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 IPO4Q8TEX9 1081 aaKnown RBP7.9□□□□□ -1.14
CXCR4-202ENST00000409817 C18orf8Q96DM3 657 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 SNX27Q96L92 541 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 ZIM3Q96PE6 472 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 NT5C1AQ9BXI3 368 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 ZDHHC18Q9NUE0 388 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.9□□□□□ -1.14
CXCR4-202ENST00000409817 WHRNQ9P202 907 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 CNTN3Q9P232 1028 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 GJD2Q9UKL4 321 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 UBQLN1Q9UMX0 589 aaKnown RBP7.9□□□□□ -1.14
CXCR4-202ENST00000409817 POLIQ9UNA4 740 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.9□□□□□ -1.14
CXCR4-202ENST00000409817 EFR3BQ9Y2G0 817 aa7.9□□□□□ -1.14
CXCR4-202ENST00000409817 C17orf102A2RUQ5 167 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 HMGB1P1B2RPK0 211 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-202ENST00000409817 MEN1O00255 615 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 DUSP11O75319 330 aaKnown RBP7.89□□□□□ -1.15
CXCR4-202ENST00000409817 CSDE1O75534 798 aaKnown RBP7.89□□□□□ -1.15
CXCR4-202ENST00000409817 TJP3O95049 919 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 NPTXRO95502 500 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 KRT7P08729 469 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 SETSIPP0DME0 302 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 HSD17B3P37058 310 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 PNPLA4P41247 253 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 CRYBB1P53674 252 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-202ENST00000409817 CALCOCO2Q13137 446 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 COL19A1Q14993 1142 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 SLMAPQ14BN4 828 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 TRADDQ15628 312 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 ZBTB6Q15916 424 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 HADHQ16836 314 aaKnown RBP7.89□□□□□ -1.15
CXCR4-202ENST00000409817 EMC10Q5UCC4 262 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 AADACL2Q6P093 401 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 DRICH1Q6PGQ1 229 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-202ENST00000409817 LCLAT1Q6UWP7 414 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 CEP128Q6ZU80 1094 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 ADAT2Q7Z6V5 191 aaKnown RBP7.89□□□□□ -1.15
CXCR4-202ENST00000409817 UNC93AQ86WB7 457 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 ATCAYQ86WG3 371 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 CCDC50Q8IVM0 306 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 ETFBKMTQ8IXQ9 262 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 ALDH16A1Q8IZ83 802 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 ZDHHC14Q8IZN3 488 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 BBOF1Q8ND07 529 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 ATL2Q8NHH9 583 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 MCEEQ96PE7 176 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 PPP1R16BQ96T49 567 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 NCAPGQ9BPX3 1015 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 TRIM51Q9BSJ1 452 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 FRMD8P1Q9BZ68 369 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-202ENST00000409817 OSBPL8Q9BZF1 889 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 TRIM7Q9C029 511 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 TRIM6Q9C030 488 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-202ENST00000409817 FAM49AQ9H0Q0 323 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-202ENST00000409817 SDCBP2Q9H190 292 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 DPH5Q9H2P9 285 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 SMYD3Q9H7B4 428 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 PRDM10Q9NQV6 1147 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 FLRT1Q9NZU1 646 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 HCN4Q9Y3Q4 1203 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 DOCK3Q8IZD9 2030 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 TNFRSF10AO00220 468 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 O00370 1275 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 TREHO43280 583 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 FAM163BP0C2L3 166 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 KRT3P12035 628 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 ITIH2P19823 946 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 CYP2B6P20813 491 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 CYP3A5P20815 502 aa7.89□□□□□ -1.15
CXCR4-202ENST00000409817 RPL7AP62424 266 aaKnown RBP7.89□□□□□ -1.15
CXCR4-202ENST00000409817 NKX3-2P78367 333 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms