RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 CEBPZQ03701 1054 aaKnown RBP12.76□□□□□ -0.37
LINC00544-201ENST00000400540 MESP2Q0VG99 397 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 ANO7Q6IWH7 933 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 SV2BQ7L1I2 683 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 TSTD1Q8NFU3 115 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 USP33Q8TEY7 942 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 HPS3Q969F9 1004 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 FUBP3Q96I24 572 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC00544-201ENST00000400540 PANK2Q9BZ23 570 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 ARHGAP26Q9UNA1 814 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.76□□□□□ -0.37
LINC00544-201ENST00000400540 NME7Q9Y5B8 376 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 SRPRBQ9Y5M8 271 aaKnown RBP12.76□□□□□ -0.37
LINC00544-201ENST00000400540 NBEAQ8NFP9 2946 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 LEFTY2O00292 366 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 LAMA5O15230 3695 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 NFATC1O95644 943 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 CYP17A1P05093 508 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 PDGFRBP09619 1106 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 TCF3P15923 654 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 MAGEA11P43364 429 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 NOVA1P51513 510 aaKnown RBP12.75□□□□□ -0.37
LINC00544-201ENST00000400540 CYP27A1Q02318 531 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 PMS2CLQ68D20 193 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 C4orf50Q6ZRC1 276 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 LIMS2Q7Z4I7 341 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 FILIP1Q7Z7B0 1213 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 CBWD2Q8IUF1 395 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 GPD1LQ8N335 351 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 ASCC3Q8N3C0 2202 aaKnown RBP12.75□□□□□ -0.37
LINC00544-201ENST00000400540 CCDC33Q8N5R6 958 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 FSIP1Q8NA03 581 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 MDGA1Q8NFP4 955 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 SPATA18Q8TC71 538 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 EXOC4Q96A65 974 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 HPDLQ96IR7 371 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 PANK4Q9NVE7 773 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 INTS13Q9NVM9 706 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 MAGEC2Q9UBF1 373 aaPredicted RBP12.75□□□□□ -0.37
LINC00544-201ENST00000400540 PCDHB13Q9Y5F0 798 aa12.75□□□□□ -0.37
LINC00544-201ENST00000400540 SPINK2P20155 84 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 GRIK1P39086 918 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 TXLNAP40222 546 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 STAT6P42226 847 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 SLC6A11P48066 632 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 CACNA2D1P54289 1103 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 RESTQ13127 1097 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 NR1H3Q13133 447 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 TMEM92Q6UXU6 159 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 DENND5BQ6ZUT9 1274 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 RASSF3Q86WH2 238 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 C12orf40Q86WS4 652 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 TTC30AQ86WT1 665 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 PCED1BQ96HM7 432 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 ANKRD36BP1Q96IX9 119 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 SPATA17Q96L03 361 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 MRPL45Q9BRJ2 306 aaKnown RBP12.74□□□□□ -0.37
LINC00544-201ENST00000400540 RNF38Q9H0F5 515 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 ZDHHC4Q9NPG8 344 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 TMEM30AQ9NV96 361 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 SMPD4Q9NXE4 827 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 CDH9Q9ULB4 789 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 MMP17Q9ULZ9 603 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 IGF2RP11717 2491 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 DMXL2Q8TDJ6 3036 aa12.74□□□□□ -0.37
LINC00544-201ENST00000400540 PCDH15Q96QU1 1955 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 C1QTNF9BB2RNN3 333 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 F8VP50 259 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 TOP3BO95985 862 aaKnown RBP12.73□□□□□ -0.37
LINC00544-201ENST00000400540 TNNC2P02585 160 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 C1QTNF9P0C862 333 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 CHRM1P11229 460 aaPredicted RBP12.73□□□□□ -0.37
LINC00544-201ENST00000400540 WARSP23381 471 aaKnown RBP12.73□□□□□ -0.37
LINC00544-201ENST00000400540 HOXD13P35453 343 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 ZNF252P-AS1Q0IIN9 211 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 IFRD2Q12894 506 aaPredicted RBP12.73□□□□□ -0.37
LINC00544-201ENST00000400540 FOXC1Q12948 553 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 MYO1EQ12965 1108 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 ALCAMQ13740 583 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 USP39Q53GS9 565 aaKnown RBP12.73□□□□□ -0.37
LINC00544-201ENST00000400540 MDH1BQ5I0G3 518 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 SH3PXD2AQ5TCZ1 1133 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 VSTM1Q6UX27 236 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 CCDC73Q6ZRK6 1079 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 DPH6Q7L8W6 267 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 ALLCQ8N6M5 410 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 PDILTQ8N807 584 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 FRMD1Q8N878 549 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 RLN3Q8WXF3 142 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 CNOT6LQ96LI5 555 aaKnown RBP12.73□□□□□ -0.37
LINC00544-201ENST00000400540 DPEP3Q9H4B8 488 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 TRPM5Q9NZQ8 1165 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 CPQQ9Y646 472 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 FREM2Q5SZK8 3169 aa12.73□□□□□ -0.37
LINC00544-201ENST00000400540 ZNF840PA6NDX5 716 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 SGK1O00141 431 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 CDX4O14627 284 aaPredicted RBP12.72□□□□□ -0.37
LINC00544-201ENST00000400540 KHNYNO15037 678 aaKnown RBP12.72□□□□□ -0.37
LINC00544-201ENST00000400540 OLFM2O95897 454 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 ABL1P00519 1130 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms