RNA–Protein interactions for RNA: ENST00000398610.2

PCDHGA10-201, Transcript of protocadherin gamma subfamily A, 10, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA10, Length 4,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA10-201ENST00000398610 MIIPQ5JXC2 388 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 NUDT18Q6ZVK8 323 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 SV2AQ7L0J3 742 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 TMC7Q7Z402 723 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 ABHD8Q96I13 439 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 RBM15Q96T37 977 aaKnown RBP eCLIP11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 RNF208Q9H0X6 261 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 RUBCNLQ9H714 662 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 NUDT5Q9UKK9 219 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 PCDHGB4Q9UN71 923 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 EPHB6O15197 1021 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 TMCC1O94876 653 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 FAM200BP0CF97 657 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 TAF6P49848 677 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 CDH8P55286 799 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 COPS2P61201 443 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 KLHL38Q2WGJ6 581 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 SCG3Q8WXD2 468 aaKnown RBP11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 HAS1Q92839 578 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 SGF29Q96ES7 293 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 GMCL1Q96IK5 515 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 SLITRK1Q96PX8 696 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 SMPD4Q9NXE4 827 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 DPP3Q9NY33 737 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 FAM198AQ9UFP1 575 aa11.02□□□□□ -0.65
PCDHGA10-201ENST00000398610 M0QYT0 321 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 CD4P01730 458 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 ARFIP2P53365 341 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 TRIM74Q86UV6 250 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 TRIM73Q86UV7 250 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 FAM83AQ86UY5 434 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 SCFD1Q8WVM8 642 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 RPRD1AQ96P16 312 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 ING2Q9H160 280 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 SENP1Q9P0U3 644 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 DBR1Q9UK59 544 aaKnown RBP11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 RRN3P2A6NIE6 340 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 STAG3L1P0CL83 205 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 AKT1P31749 480 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 RARRES1P49788 294 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 DHX34Q14147 1143 aaKnown RBP11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 ATL2Q8NHH9 583 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 TTC8Q8TAM2 541 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 CYFIP2Q96F07 1278 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 SRPK1Q96SB4 655 aaKnown RBP11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 L3MBTL1Q9Y468 752 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 RNF103-CHMP3A0A140T963 221 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 RCCD1A6NED2 376 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 SYCE1LA8MT33 242 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 DCDC2CA8MYV0 355 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 CYBBP04839 570 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 GFAPP14136 432 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 CARSP49589 748 aaKnown RBP11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 IRAK1P51617 712 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 AP2B1P63010 937 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 LONRF1Q17RB8 773 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 FSCBQ5H9T9 825 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 NUDCD3Q8IVD9 361 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 KAT2BQ92831 832 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 YME1L1Q96TA2 773 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 MROH8Q9H579 483 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 ZSCAN32Q9NX65 697 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 NDE1Q9NXR1 346 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 HES2Q9Y543 173 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 PCDHB7Q9Y5E2 793 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 C3orf70A6NLC5 250 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 NKRFO15226 690 aaKnown RBP eCLIP11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 GCLCP48506 637 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 WASHC5Q12768 1159 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 FAM71DQ8N9W8 422 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 TRPM4Q8TD43 1214 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 HNRNPLLQ8WVV9 542 aaKnown RBP11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 STAMBPL1Q96FJ0 436 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 OLFM3Q96PB7 478 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 SNTG2Q9NY99 539 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 C6orf203Q9P0P8 240 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 ARHGAP20Q9P2F6 1191 aa11.01□□□□□ -0.65
PCDHGA10-201ENST00000398610 SSU72P8A0A1W2PR75 194 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 SLC16A3O15427 465 aaKnown RBP11□□□□□ -0.65
PCDHGA10-201ENST00000398610 SNHG28P0DPA3 235 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 KCNA2P16389 499 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 RRM1P23921 792 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 DSG3P32926 999 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 ALDH1A3P47895 512 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 LRRC74AQ0VAA2 488 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 NAB2Q15742 525 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 TMEM119Q4V9L6 283 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 TRAPPC11Q7Z392 1133 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 CDKL3Q8IVW4 592 aaPredicted RBP11□□□□□ -0.65
PCDHGA10-201ENST00000398610 TTC39CQ8N584 583 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 TATDN2Q93075 761 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 ZBTB10Q96DT7 871 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 MAGEB5Q9BZ81 275 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 CDKN2AIPQ9NXV6 580 aaPredicted RBP11□□□□□ -0.65
PCDHGA10-201ENST00000398610 PLAGL2Q9UPG8 496 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 ARL2BPQ9Y2Y0 163 aa11□□□□□ -0.65
PCDHGA10-201ENST00000398610 TNRC6CQ9HCJ0 1690 aaKnown RBP11□□□□□ -0.65
PCDHGA10-201ENST00000398610 TPRP12270 2363 aaKnown RBP11□□□□□ -0.65
PCDHGA10-201ENST00000398610 EEF2KO00418 725 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms