RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 PCDHA6Q9UN73 950 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 PCDHA8Q9Y5H6 950 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 UHRF1BP1LA0JNW5 1464 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 PRXQ9BXM0 1461 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 SF3B1O75533 1304 aaKnown RBP eCLIP13.74□□□□□ -0.212e-12■■■■■ 275.7
HIPK3-202ENST00000379016 PMPCBO75439 489 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 DLG1Q12959 904 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 DHX34Q14147 1143 aaKnown RBP13.74□□□□□ -0.21
HIPK3-202ENST00000379016 LIN54Q6MZP7 749 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 FAM160B2Q86V87 743 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 SMYD1Q8NB12 490 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 RMND5BQ96G75 393 aaPredicted RBP13.74□□□□□ -0.21
HIPK3-202ENST00000379016 REXO5Q96IC2 774 aaKnown RBP13.74□□□□□ -0.21
HIPK3-202ENST00000379016 FOXP1Q9H334 677 aaPredicted RBP13.74□□□□□ -0.21
HIPK3-202ENST00000379016 SHOC2Q9UQ13 582 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 GPC6Q9Y625 555 aaPredicted RBP13.74□□□□□ -0.21
HIPK3-202ENST00000379016 ADCY9O60503 1353 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 C1orf232A0A0U1RR37 186 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 PRAMEF22A3QJZ6 481 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 IFRD1O00458 451 aaPredicted RBP13.74□□□□□ -0.21
HIPK3-202ENST00000379016 KMOO15229 486 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 CHRNB3Q05901 458 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 CIAPIN1Q6FI81 312 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 THOC7Q6I9Y2 204 aaKnown RBP13.74□□□□□ -0.21
HIPK3-202ENST00000379016 LCORLQ8N3X6 602 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 TRNT1Q96Q11 434 aaKnown RBP13.74□□□□□ -0.21
HIPK3-202ENST00000379016 WNT8AQ9H1J5 351 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 RNF181Q9P0P0 153 aa13.74□□□□□ -0.21
HIPK3-202ENST00000379016 MYO3BQ8WXR4 1341 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 SEMA3DO95025 777 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 PABPC1P11940 636 aaKnown RBP13.73□□□□□ -0.21
HIPK3-202ENST00000379016 C4orf33Q8N1A6 199 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 SLC30A5Q8TAD4 765 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 CCSER1Q9C0I3 900 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 KLHL28Q9NXS3 571 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 XDHP47989 1333 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 VPS4BO75351 444 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 NCK1P16333 377 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 HALP42357 657 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 ZNF200P98182 395 aaPredicted RBP13.73□□□□□ -0.21
HIPK3-202ENST00000379016 CYP20A1Q6UW02 462 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 ZNF354BQ96LW1 612 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 DLGAP2Q9P1A6 1054 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 MGRN1O60291 552 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 MLPHQ9BV36 600 aaPredicted RBP13.73□□□□□ -0.21
HIPK3-202ENST00000379016 CNPPD1Q9BV87 410 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 LIN7AO14910 233 aaPredicted RBP13.73□□□□□ -0.21
HIPK3-202ENST00000379016 BMP10O95393 424 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 TSPAN19P0C672 248 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 LONRF1Q17RB8 773 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 RAB11FIP2Q7L804 512 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 SPATA21Q7Z572 469 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 MCPH1Q8NEM0 835 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 BBS4Q96RK4 519 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 KCNS3Q9BQ31 491 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 DDX47Q9H0S4 455 aaKnown RBP13.73□□□□□ -0.21
HIPK3-202ENST00000379016 TUBGCP4Q9UGJ1 667 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 STX16-NPEPL1H3BU86 382 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 NR5A2O00482 541 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 STX16O14662 325 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 MPOP05164 745 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 MARSP56192 900 aaKnown RBP13.73□□□□□ -0.21
HIPK3-202ENST00000379016 EFL1Q7Z2Z2 1120 aaKnown RBP13.73□□□□□ -0.21
HIPK3-202ENST00000379016 SPPL2AQ8TCT8 520 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 GMCL1Q96IK5 515 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 TOR4AQ9NXH8 423 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 NAGPAQ9UK23 515 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 PRKAB1Q9Y478 270 aa13.73□□□□□ -0.21
HIPK3-202ENST00000379016 C2orf81A6NN90 581 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 TEX33O43247 280 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 ITGB6P18564 788 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 PRELPP51888 382 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 MYBPC2Q14324 1141 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 RABL6Q3YEC7 729 aaPredicted RBP13.72□□□□□ -0.21
HIPK3-202ENST00000379016 EMBQ6PCB8 327 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 KBTBD7Q8WVZ9 684 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 TEX13BQ9BXU2 312 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 CACNA1FO60840 1977 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 A0A0X1KG70 313 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 SLC25A12O75746 678 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 KLHL2O95198 593 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 LCA5LO95447 670 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 CHI3L2Q15782 390 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 ALG11Q2TAA5 492 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 PADI6Q6TGC4 694 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 TRMT11Q7Z4G4 463 aaKnown RBP13.72□□□□□ -0.21
HIPK3-202ENST00000379016 SETD6Q8TBK2 473 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 UCMAQ8WVF2 138 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 CPA5Q8WXQ8 436 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 GRAMD1AQ96CP6 724 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 ZNF333Q96JL9 665 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 CYP4F12Q9HCS2 524 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 CHST12Q9NRB3 414 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 CMTM6Q9NX76 183 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 LCMT1Q9UIC8 334 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 RAB23Q9ULC3 237 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 ARL5CA6NH57 179 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 GH2P01242 217 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 CES1P23141 567 aa13.72□□□□□ -0.21
HIPK3-202ENST00000379016 CRYMQ14894 314 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms