RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 SCUBE3Q8IX30 993 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 PCDH9Q9HC56 1237 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 SEPT10Q9P0V9 454 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 KBTBD13C9JR72 458 aa13.52□□□□□ -0.24
USP11-204ENST00000377107 ZBED1O96006 694 aa13.52□□□□□ -0.24
USP11-204ENST00000377107 PYGBP11216 843 aa13.52□□□□□ -0.24
USP11-204ENST00000377107 PTPN11Q06124 597 aaPredicted RBP13.52□□□□□ -0.24
USP11-204ENST00000377107 BNIP1Q12981 228 aa13.52□□□□□ -0.24
USP11-204ENST00000377107 KBTBD12Q3ZCT8 623 aa13.52□□□□□ -0.24
USP11-204ENST00000377107 ZC3H12AQ5D1E8 599 aaKnown RBP13.52□□□□□ -0.24
USP11-204ENST00000377107 METTL7BQ6UX53 244 aa13.52□□□□□ -0.24
USP11-204ENST00000377107 NLRP9Q7RTR0 991 aa13.52□□□□□ -0.24
USP11-204ENST00000377107 ACOT1Q86TX2 421 aa13.52□□□□□ -0.24
USP11-204ENST00000377107 HPDLQ96IR7 371 aa13.52□□□□□ -0.24
USP11-204ENST00000377107 CEP41Q9BYV8 373 aa13.52□□□□□ -0.24
USP11-204ENST00000377107 CDT1Q9H211 546 aa13.52□□□□□ -0.24
USP11-204ENST00000377107 RNPEPQ9H4A4 650 aa13.52□□□□□ -0.24
USP11-204ENST00000377107 TXLNGQ9NUQ3 528 aa13.52□□□□□ -0.24
USP11-204ENST00000377107 SNX9Q9Y5X1 595 aa13.52□□□□□ -0.24
USP11-204ENST00000377107 USH1CQ9Y6N9 552 aa13.52□□□□□ -0.24
USP11-204ENST00000377107 E5RJQ4 531 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 GPR25O00155 361 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 ZNF286BP0CG31 522 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 ZNF280AP59817 542 aaPredicted RBP13.52□□□□□ -0.25
USP11-204ENST00000377107 FAAP100Q0VG06 881 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 MXD4Q14582 209 aaPredicted RBP13.52□□□□□ -0.25
USP11-204ENST00000377107 PPP2R5DQ14738 602 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 OTOAQ7RTW8 1153 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 APOBEC3FQ8IUX4 373 aaKnown RBP13.52□□□□□ -0.25
USP11-204ENST00000377107 CCDC110Q8TBZ0 833 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 NOP53Q9NZM5 478 aaKnown RBP13.52□□□□□ -0.25
USP11-204ENST00000377107 CHKBQ9Y259 395 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 MYH9P35579 1960 aaKnown RBP13.52□□□□□ -0.25
USP11-204ENST00000377107 BGNP21810 368 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 MXRA7P84157 204 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 MCL1Q07820 350 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 ZPBP2Q6X784 338 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 VPS52Q8N1B4 723 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 CHST13Q8NET6 341 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 KIF12Q96FN5 646 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 SDCBP2Q9H190 292 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 CCDC134Q9H6E4 229 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 HES2Q9Y543 173 aa13.52□□□□□ -0.25
USP11-204ENST00000377107 ASMTLO95671 621 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 HOXC6P09630 235 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 RPS12P25398 132 aaKnown RBP13.51□□□□□ -0.25
USP11-204ENST00000377107 GCAP28676 217 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 ADORA2BP29275 332 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 ABCD1P33897 745 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 PCK1P35558 622 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 ASPAP45381 313 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 NDST1P52848 882 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 OAZ1P54368 228 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 BCAR1P56945 870 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 POTEAQ6S8J7 498 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 CCDC125Q86Z20 511 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 C1orf127Q8N9H9 656 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 OR6B3Q8NGW1 331 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 RFWD2Q8NHY2 731 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 MCUR1Q96AQ8 359 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 FAM149B1Q96BN6 582 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 B3GNT5Q9BYG0 378 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 ELOVL4Q9GZR5 314 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 ARMCX1Q9P291 453 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 ALOX15BO15296 676 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 DDNO94850 711 aaPredicted RBP13.51□□□□□ -0.25
USP11-204ENST00000377107 EIF4BP23588 611 aaKnown RBP13.51□□□□□ -0.25
USP11-204ENST00000377107 TNFAIP8L3Q5GJ75 292 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 IGDCC3Q8IVU1 814 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 ARFGAP1Q8N6T3 406 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 DTX3LQ8TDB6 740 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 MECRQ9BV79 373 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 MAGEB5Q9BZ81 275 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 DHX35Q9H5Z1 703 aaKnown RBP13.51□□□□□ -0.25
USP11-204ENST00000377107 FBXO6Q9NRD1 293 aaPredicted RBP13.51□□□□□ -0.25
USP11-204ENST00000377107 ASNSD1Q9NWL6 643 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 HEY2Q9UBP5 337 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 CPSF3Q9UKF6 684 aaKnown RBP13.51□□□□□ -0.25
USP11-204ENST00000377107 SMG5Q9UPR3 1016 aaKnown RBP13.51□□□□□ -0.25
USP11-204ENST00000377107 STYXL1Q9Y6J8 313 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 CLUHO75153 1309 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 LSM8O95777 96 aaKnown RBP13.51□□□□□ -0.25
USP11-204ENST00000377107 PDHA1P08559 390 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 INSRRP14616 1297 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 NR1H3Q13133 447 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 OASLQ15646 514 aaKnown RBP13.51□□□□□ -0.25
USP11-204ENST00000377107 DNERQ8NFT8 737 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 RILPQ96NA2 401 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 NUDCD1Q96RS6 583 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 TMEM134Q9H6X4 195 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 LGALS13Q9UHV8 139 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 SHOC2Q9UQ13 582 aa13.51□□□□□ -0.25
USP11-204ENST00000377107 SIGLEC16A6NMB1 481 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 TRIM49D1C9J1S8 452 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 LCP1P13796 627 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 PHKA2P46019 1235 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 RAD23BP54727 409 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 CLDN10P78369 228 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 GHRHRQ02643 423 aa13.5□□□□□ -0.25
USP11-204ENST00000377107 DPYSL3Q14195 570 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms