RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ATP11CQ8NB49 1132 aa12.71□□□□□ -0.38
C9orf3-203ENST00000375315 ARHGEF26Q96DR7 871 aa12.71□□□□□ -0.38
C9orf3-203ENST00000375315 PRICKLE1Q96MT3 831 aaPredicted RBP12.71□□□□□ -0.38
C9orf3-203ENST00000375315 ZNF180Q9UJW8 692 aa12.71□□□□□ -0.38
C9orf3-203ENST00000375315 ADAMTS5Q9UNA0 930 aa12.71□□□□□ -0.38
C9orf3-203ENST00000375315 DOCK1Q14185 1865 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 DICER1Q9UPY3 1922 aaKnown RBP12.7□□□□□ -0.38
C9orf3-203ENST00000375315 TMEM110-MUSTN1A8MSY1 372 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 BOLA2-SMG1P6H3BVE0 249 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 DNAJC6O75061 913 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 FDX1P10109 184 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 PAX3P23760 479 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 ITGA8P53708 1063 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 PEX3P56589 373 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 RPL26P61254 145 aaKnown RBP12.7□□□□□ -0.38
C9orf3-203ENST00000375315 XIAPP98170 497 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 SEPT7Q16181 437 aaKnown RBP12.7□□□□□ -0.38
C9orf3-203ENST00000375315 MMEL1Q495T6 779 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 CCDC60Q8IWA6 550 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-203ENST00000375315 SLC15A3Q8IY34 581 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 C12orf50Q8NA57 414 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-203ENST00000375315 RIT2Q99578 217 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 TCHPQ9BT92 498 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 JPH1Q9HDC5 661 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-203ENST00000375315 SEPT11Q9NVA2 429 aaKnown RBP12.7□□□□□ -0.38
C9orf3-203ENST00000375315 ANAPC5Q9UJX4 755 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 FAF1Q9UNN5 650 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-203ENST00000375315 MTO1Q9Y2Z2 717 aaKnown RBP12.7□□□□□ -0.38
C9orf3-203ENST00000375315 FRMPD4Q14CM0 1322 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 EXOC1LA0A1B0GW35 172 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 CLPTM1O96005 669 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 ACTR3P61158 418 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 ACTR2P61160 394 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 PDK3Q15120 406 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 PLEKHG4Q58EX7 1191 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 TMCO4Q5TGY1 634 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 KLHL35Q6PF15 583 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 SYDE1Q6ZW31 735 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-203ENST00000375315 ADGRG6Q86SQ4 1221 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 TMPRSS6Q8IU80 811 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 CROCCP3Q8IVE0 287 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 DQX1Q8TE96 717 aaKnown RBP12.7□□□□□ -0.38
C9orf3-203ENST00000375315 TRAIPQ9BWF2 469 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 THAP2Q9H0W7 228 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 LRRC19Q9H756 370 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 EURLQ9NYK6 297 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 THEGQ9P2T0 379 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 ABT1Q9ULW3 272 aaKnown RBP12.7□□□□□ -0.38
C9orf3-203ENST00000375315 DMTF1Q9Y222 760 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 SSX2IPQ9Y2D8 614 aa12.7□□□□□ -0.38
C9orf3-203ENST00000375315 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.7□□□□□ -0.38
C9orf3-203ENST00000375315 WDR64B1ANS9 1081 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 K7ENM7 598 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 SLC16A4O15374 487 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 CNMDO75829 334 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 ATF2P15336 505 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 VCLP18206 1134 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 TNFAIP3P21580 790 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 RPA3P35244 121 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-203ENST00000375315 CASP4P49662 377 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 LDLRAD1Q5T700 205 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 TMEM53Q6P2H8 277 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 ZC3H3Q8IXZ2 948 aaKnown RBP12.69□□□□□ -0.38
C9orf3-203ENST00000375315 RFWD2Q8NHY2 731 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 SLCO2A1Q92959 643 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 WNT8AQ9H1J5 351 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 TBC1D22BQ9NU19 505 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 SLC9A2Q9UBY0 812 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 GRID1Q9ULK0 1009 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 NUMBLQ9Y6R0 609 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 TXNDC9O14530 226 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 AP1G1O43747 822 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 SOX5P35711 763 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 MARCKSL1P49006 195 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 HADHBP55084 474 aaKnown RBP12.69□□□□□ -0.38
C9orf3-203ENST00000375315 CDK16Q00536 496 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 C1orf146Q5VVC0 180 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 RAPH1Q70E73 1250 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 PATL1Q86TB9 770 aaKnown RBP12.69□□□□□ -0.38
C9orf3-203ENST00000375315 RIOX2Q8IUF8 465 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 PRPF31Q8WWY3 499 aaKnown RBP12.69□□□□□ -0.38
C9orf3-203ENST00000375315 POP1Q99575 1024 aaKnown RBP12.69□□□□□ -0.38
C9orf3-203ENST00000375315 PARVGQ9HBI0 331 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 TUFT1Q9NNX1 390 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 TUBA8Q9NY65 449 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-203ENST00000375315 GCNT4Q9P109 453 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 PCDHA10Q9Y5I2 948 aa12.69□□□□□ -0.38
C9orf3-203ENST00000375315 COL11A1P12107 1806 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-203ENST00000375315 HTR3EA5X5Y0 456 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 B2RBV5 119 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 BUD23O43709 281 aaKnown RBP12.68□□□□□ -0.38
C9orf3-203ENST00000375315 USP1O94782 785 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 MAN1A1P33908 653 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 ACADVLP49748 655 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 IGBP1P78318 339 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 PPIDQ08752 370 aaKnown RBP12.68□□□□□ -0.38
C9orf3-203ENST00000375315 SLC1A5Q15758 541 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 ANKRD20A4Q4UJ75 823 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 PDCD4Q53EL6 469 aaKnown RBP12.68□□□□□ -0.38
C9orf3-203ENST00000375315 HYIQ5T013 277 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms