RNA–Protein interactions for RNA: ENST00000372397.6

TSC22D3-206, Transcript of TSC22 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D3, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-206ENST00000372397 SERPINB12Q96P63 405 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 RBM15Q96T37 977 aaKnown RBP eCLIP13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 TRIM6Q9C030 488 aaPredicted RBP13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 C10orf88Q9H8K7 445 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 TPX2Q9ULW0 747 aaKnown RBP13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 NME7Q9Y5B8 376 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 FAM169AQ9Y6X4 670 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 IGF2BP3O00425 579 aaKnown RBP eCLIP13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 TREHO43280 583 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 RECQL4O94761 1208 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 IFNB1P01574 187 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 PDGFRAP16234 1089 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 MAGEA4P43358 317 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 PSEN2P49810 448 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 RAB6CQ53S08 254 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 SWT1Q5T5J6 900 aaKnown RBP13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 ERMARDQ5T6L9 678 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 PMF1Q6P1K2 205 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 EXOC3L1Q86VI1 746 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 RFX6Q8HWS3 928 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 RELL1Q8IUW5 271 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 TMEM40Q8WWA1 233 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 XPO6Q96QU8 1125 aaKnown RBP13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 PEBP4Q96S96 227 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 CNPY3Q9BT09 278 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 FOXP3Q9BZS1 431 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 RAB6CQ9H0N0 254 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 FAM49BQ9NUQ9 324 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 GJD2Q9UKL4 321 aa13.35□□□□□ -0.27
TSC22D3-206ENST00000372397 C2CD4BA6NLJ0 364 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 MYL3P08590 195 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 PECAM1P16284 738 aaPredicted RBP13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 PCK1P35558 622 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 HUNKP57058 714 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 ADAM17P78536 824 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 BEX3Q00994 111 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 STILQ15468 1287 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 C15orf59Q2T9L4 293 aaPredicted RBP13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 C9orf57Q5W0N0 161 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 TTC30AQ86WT1 665 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 MICALL1Q8N3F8 863 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 LRRC52Q8N7C0 313 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 TTC13Q8NBP0 860 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 CALN1Q9BXU9 219 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 MIS12Q9H081 205 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 PCDH9Q9HC56 1237 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 SAYSD1Q9NPB0 183 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 KLK14Q9P0G3 267 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 CNTN3Q9P232 1028 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 CTNNAL1Q9UBT7 734 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 PIN4Q9Y237 131 aaKnown RBP13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 HAS3O00219 553 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 MORF4L2Q15014 288 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 SNX17Q15036 470 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 PCBP1Q15365 356 aaKnown RBP eCLIP13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 CDO1Q16878 200 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 SOWAHAQ2M3V2 549 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 PKDCCQ504Y2 493 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 RNASEH2BQ5TBB1 312 aaKnown RBP13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 CYP4F22Q6NT55 531 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 CHADLQ6NUI6 762 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 CEP128Q6ZU80 1094 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 TAOK1Q7L7X3 1001 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 SCUBE3Q8IX30 993 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 OR6B3Q8NGW1 331 aa13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 ARHGEF2Q92974 986 aaKnown RBP13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 FRMD8P1Q9BZ68 369 aaPredicted RBP13.34□□□□□ -0.27
TSC22D3-206ENST00000372397 PDCD11Q14690 1871 aaKnown RBP13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 FOXO6A8MYZ6 492 aa13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 HCRTO43612 131 aa13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 TCEA3O75764 348 aa13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 CYP2B6P20813 491 aa13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 GDF10P55107 478 aa13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 MMRN1Q13201 1228 aa13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 TAF1CQ15572 869 aaPredicted RBP13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 QPCTQ16769 361 aa13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 HP1BP3Q5SSJ5 553 aaPredicted RBP13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 CYP4V2Q6ZWL3 525 aaPredicted RBP13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 SLC35F5Q8WV83 523 aa13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 ATXN2LQ8WWM7 1075 aaKnown RBP13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 SLC4A5Q9BY07 1137 aa13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 AP5M1Q9H0R1 490 aa13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 RNF39Q9H2S5 420 aa13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 DPEP3Q9H4B8 488 aa13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 INTS9Q9NV88 658 aaKnown RBP13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 GEMIN8Q9NWZ8 242 aaKnown RBP13.33□□□□□ -0.28
TSC22D3-206ENST00000372397 SMIM28A0A1B0GU29 152 aa13.32□□□□□ -0.28
TSC22D3-206ENST00000372397 GABBR2O75899 941 aa13.32□□□□□ -0.28
TSC22D3-206ENST00000372397 PDGFRBP09619 1106 aa13.32□□□□□ -0.28
TSC22D3-206ENST00000372397 CREB1P16220 341 aa13.32□□□□□ -0.28
TSC22D3-206ENST00000372397 AXLP30530 894 aa13.32□□□□□ -0.28
TSC22D3-206ENST00000372397 CPT1AP50416 773 aa13.32□□□□□ -0.28
TSC22D3-206ENST00000372397 CDH6P55285 790 aa13.32□□□□□ -0.28
TSC22D3-206ENST00000372397 ATP11AP98196 1134 aa13.32□□□□□ -0.28
TSC22D3-206ENST00000372397 IRF5Q13568 498 aa13.32□□□□□ -0.28
TSC22D3-206ENST00000372397 CCDC14Q49A88 953 aa13.32□□□□□ -0.28
TSC22D3-206ENST00000372397 OLFML1Q6UWY5 402 aa13.32□□□□□ -0.28
TSC22D3-206ENST00000372397 SESTD1Q86VW0 696 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms