RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 BAHD1Q8TBE0 780 aaPredicted RBP9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 SH3RF2Q8TEC5 729 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 KIFAP3Q92845 792 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 ERLEC1Q96DZ1 483 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 ZNF274Q96GC6 653 aaPredicted RBP9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 GCNAQ96QF7 691 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 TCHPQ9BT92 498 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 RUSC1Q9BVN2 902 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 PRORYQ9H606 182 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 CD248Q9HCU0 757 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 ABI2Q9NYB9 513 aaPredicted RBP9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 MAGED2Q9UNF1 606 aaPredicted RBP9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 PTPRQQ9UMZ3 2332 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 PIEZO2Q9H5I5 2752 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 IGHV1OR15-9A0A0B4J2B8 117 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 BTBD18B2RXH4 712 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 GABRG2P18507 467 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 CYP3A5P20815 502 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 MAOBP27338 520 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 IFNAR2P48551 515 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 ZNF33AQ06730 810 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 MCL1Q07820 350 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 SLC14A1Q13336 389 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 HNRNPDQ14103 355 aaKnown RBP9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 NOLC1Q14978 699 aaKnown RBP eCLIP9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 DDR2Q16832 855 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 BMP2KLQ5H9B9 411 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 C9orf57Q5W0N0 161 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 SCARA3Q6AZY7 606 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 ZNF605Q86T29 641 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 MIB1Q86YT6 1006 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 PHTF2Q8N3S3 785 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 CEP76Q8TAP6 659 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 MRPS31Q92665 395 aaKnown RBP9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 SPACA7Q96KW9 195 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 PI4K2AQ9BTU6 479 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 TRPC7Q9HCX4 862 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 CALCOCO1Q9P1Z2 691 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 BCCIPQ9P287 314 aaKnown RBP eCLIP9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 DENND4CQ5VZ89 1909 aa9.17□□□□□ -0.94
HMGB1P39-201ENST00000366304 PTPN13Q12923 2485 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 STK36Q9NRP7 1315 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 PLXND1Q9Y4D7 1925 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 RNF223E7ERA6 249 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 PIRO00625 290 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 TLX3O43711 291 aaPredicted RBP9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 HIP1RO75146 1068 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 TOM1L1O75674 476 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 ALDH1A2O94788 518 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 NOL4O94818 638 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 ADRB2P07550 413 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 NFICP08651 508 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 ODC1P11926 461 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 MCM7P33993 719 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 KRT2P35908 639 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 MRPS21P82921 87 aaKnown RBP9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 GRIK2Q13002 908 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 TAF12Q16514 161 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 SPATA1Q5VX52 437 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 WSCD1Q658N2 575 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 RUFY3Q7L099 469 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 KCNK18Q7Z418 384 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 TRIML1Q8N9V2 468 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 HSPA12BQ96MM6 686 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 YTHDC1Q96MU7 727 aaKnown RBP9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 SPSB2Q99619 263 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 SLC6A17Q9H1V8 727 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 PLEKHA5Q9HAU0 1116 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 KMT5AQ9NQR1 393 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 KIAA1522Q9P206 1035 aaPredicted RBP9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 ZMYM5Q9UJ78 669 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 UBQLN1Q9UMX0 589 aaKnown RBP9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 APOBEC2Q9Y235 224 aaKnown RBP9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 BTBD3Q9Y2F9 522 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 PCDHB9Q9Y5E1 797 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 TEX15Q9BXT5 2789 aa9.16□□□□□ -0.94
HMGB1P39-201ENST00000366304 CITO14578 2027 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 A0A0A0MRY4 1105 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 A0A1W2PQF6 199 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 ANO9A1A5B4 782 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 E9PMD0 336 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 J3QKU1 62 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 TRIM66O15016 1216 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 TRIM24O15164 1050 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 AP5Z1O43299 807 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 HCRTO43612 131 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 KAT7O95251 611 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 CKMP06732 381 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 CLTAP09496 248 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 USP17L7P0C7H9 530 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 MAPTP10636 758 aaKnown RBP9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 CYP2F1P24903 491 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 WASP42768 502 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 CLDN6P56747 220 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 KDSRQ06136 332 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 MYO1EQ12965 1108 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 PLEKHG6Q3KR16 790 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 JADE1Q6IE81 842 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 RHBDF2Q6PJF5 856 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 FILIP1Q7Z7B0 1213 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms