RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 C11orf70Q9BRQ4 267 aa19.55■□□□□ 0.72
SNX11-201ENST00000359238 IMPG2Q9BZV3 1241 aa19.55■□□□□ 0.72
SNX11-201ENST00000359238 NXF3Q9H4D5 531 aaKnown RBP19.55■□□□□ 0.72
SNX11-201ENST00000359238 PRKAG3Q9UGI9 489 aa19.55■□□□□ 0.72
SNX11-201ENST00000359238 LRRD1A4D1F6 860 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 TCP11X1B4DZS4 312 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 RTN3O95197 1032 aaPredicted RBP19.54■□□□□ 0.72
SNX11-201ENST00000359238 TNNC2P02585 160 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 AUHQ13825 339 aaKnown RBP19.54■□□□□ 0.72
SNX11-201ENST00000359238 LBRQ14739 615 aaKnown RBP19.54■□□□□ 0.72
SNX11-201ENST00000359238 ANO7Q6IWH7 933 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 MON1BQ7L1V2 547 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 SPATA21Q7Z572 469 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 RHOT2Q8IXI1 618 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 LMNTD2Q8IXW0 634 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 FITM2Q8N6M3 262 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 TJP2Q9UDY2 1190 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 GTF3C4Q9UKN8 822 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 ASGR1P07306 291 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 DARSP14868 501 aaKnown RBP19.54■□□□□ 0.72
SNX11-201ENST00000359238 TBXAS1P24557 533 aaPredicted RBP19.54■□□□□ 0.72
SNX11-201ENST00000359238 POLR2BP30876 1174 aaKnown RBP19.54■□□□□ 0.72
SNX11-201ENST00000359238 AP3M2P53677 418 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 HADHBP55084 474 aaKnown RBP19.54■□□□□ 0.72
SNX11-201ENST00000359238 CENPCQ03188 943 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 PTP4A2Q12974 167 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 WDTC1Q8N5D0 677 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 FBXO25Q8TCJ0 367 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 KCNV2Q8TDN2 545 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 EPS8L3Q8TE67 593 aaKnown RBP19.54■□□□□ 0.72
SNX11-201ENST00000359238 ZFAND2BQ8WV99 257 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 DYDC1Q8WWB3 177 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 RASAL2Q9UJF2 1139 aa19.54■□□□□ 0.72
SNX11-201ENST00000359238 CASP8AP2Q9UKL3 1982 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 SCN10AQ9Y5Y9 1956 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 RASGRF2O14827 1237 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 SMIM24O75264 130 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 HMGCRP04035 888 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 GNAT1P11488 350 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 AKAP5P24588 427 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 HOXD10P28358 340 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 HOXC8P31273 242 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 KCNA10Q16322 511 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 GDF6Q6KF10 455 aaPredicted RBP19.53■□□□□ 0.72
SNX11-201ENST00000359238 JAMLQ86YT9 394 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 ZDHHC14Q8IZN3 488 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 RNF39Q9H2S5 420 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 SEMA4AQ9H3S1 761 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 SNX24Q9Y343 169 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 CCDC15Q0P6D6 951 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 SNX1Q13596 522 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 SNX17Q15036 470 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 SURF1Q15526 300 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 CLUL1Q15846 466 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 GALNT15Q8N3T1 639 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 FBF1Q8TES7 1133 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 C18orf25Q96B23 403 aaPredicted RBP19.53■□□□□ 0.72
SNX11-201ENST00000359238 APOL6Q9BWW8 343 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 RNPEPL1Q9HAU8 725 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 GTF2IRD1Q9UHL9 959 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 TRIM33Q9UPN9 1127 aa19.53■□□□□ 0.72
SNX11-201ENST00000359238 LAMA2P24043 3122 aaKnown RBP19.52■□□□□ 0.72
SNX11-201ENST00000359238 KPNA6O60684 536 aa19.52■□□□□ 0.72
SNX11-201ENST00000359238 IL18RAPO95256 599 aa19.52■□□□□ 0.72
SNX11-201ENST00000359238 EIF4BP23588 611 aaKnown RBP19.52■□□□□ 0.72
SNX11-201ENST00000359238 MXRA7P84157 204 aa19.52■□□□□ 0.72
SNX11-201ENST00000359238 TCEAL1Q15170 157 aa19.52■□□□□ 0.72
SNX11-201ENST00000359238 ZNF296Q8WUU4 475 aaPredicted RBP19.52■□□□□ 0.72
SNX11-201ENST00000359238 CD101Q93033 1021 aa19.52■□□□□ 0.72
SNX11-201ENST00000359238 ACAP3Q96P50 834 aa19.52■□□□□ 0.72
SNX11-201ENST00000359238 ADPGKQ9BRR6 497 aa19.52■□□□□ 0.72
SNX11-201ENST00000359238 ROPN1BQ9BZX4 212 aaPredicted RBP19.52■□□□□ 0.72
SNX11-201ENST00000359238 ROPN1Q9HAT0 212 aaPredicted RBP19.52■□□□□ 0.72
SNX11-201ENST00000359238 ERVK-5Q9HDB9 667 aa19.52■□□□□ 0.72
SNX11-201ENST00000359238 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.52■□□□□ 0.72
SNX11-201ENST00000359238 GRHL1Q9NZI5 618 aa19.52■□□□□ 0.72
SNX11-201ENST00000359238 TUBGCP4Q9UGJ1 667 aa19.52■□□□□ 0.72
SNX11-201ENST00000359238 ASB3Q9Y575 518 aa19.52■□□□□ 0.72
SNX11-201ENST00000359238 MTA2O94776 668 aa19.52■□□□□ 0.71
SNX11-201ENST00000359238 ATP6V1C1P21283 382 aa19.52■□□□□ 0.71
SNX11-201ENST00000359238 CALB2P22676 271 aa19.52■□□□□ 0.71
SNX11-201ENST00000359238 PARP6Q2NL67 630 aa19.52■□□□□ 0.71
SNX11-201ENST00000359238 RNF43Q68DV7 783 aa19.52■□□□□ 0.71
SNX11-201ENST00000359238 TRIM68Q6AZZ1 485 aa19.52■□□□□ 0.71
SNX11-201ENST00000359238 EXOC3L1Q86VI1 746 aa19.52■□□□□ 0.71
SNX11-201ENST00000359238 ITFG2Q969R8 447 aa19.52■□□□□ 0.71
SNX11-201ENST00000359238 CARD9Q9H257 536 aa19.52■□□□□ 0.71
SNX11-201ENST00000359238 KLK14Q9P0G3 267 aa19.52■□□□□ 0.71
SNX11-201ENST00000359238 NKX1-2Q9UD57 310 aaPredicted RBP19.52■□□□□ 0.71
SNX11-201ENST00000359238 MTRF1LQ9UGC7 380 aaKnown RBP19.52■□□□□ 0.71
SNX11-201ENST00000359238 PARP2Q9UGN5 583 aa19.52■□□□□ 0.71
SNX11-201ENST00000359238 CYTH4Q9UIA0 394 aa19.52■□□□□ 0.71
SNX11-201ENST00000359238 UNC5CO95185 931 aa19.51■□□□□ 0.71
SNX11-201ENST00000359238 TMEM132DQ14C87 1099 aa19.51■□□□□ 0.71
SNX11-201ENST00000359238 NUGGCQ68CJ6 796 aa19.51■□□□□ 0.71
SNX11-201ENST00000359238 C11orf63Q6NUN7 778 aa19.51■□□□□ 0.71
SNX11-201ENST00000359238 CTNNAL1Q9UBT7 734 aa19.51■□□□□ 0.71
SNX11-201ENST00000359238 ANAPC7Q9UJX3 599 aa19.51■□□□□ 0.71
SNX11-201ENST00000359238 PDCD11Q14690 1871 aaKnown RBP19.51■□□□□ 0.71
SNX11-201ENST00000359238 RALGAPA2Q2PPJ7 1873 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms