RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 PCDHB2Q9Y5E7 798 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 TRIM43BA6NCK2 446 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 PPP1R3GB7ZBB8 358 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 EPHB2P29323 1055 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 KYAT1Q16773 422 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 DGKKQ5KSL6 1271 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 TYW3Q6IPR3 259 aaKnown RBP12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 BNC2Q6ZN30 1099 aaPredicted RBP12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 VPS37AQ8NEZ2 397 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 PRCCQ92733 491 aaPredicted RBP12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 ABI2Q9NYB9 513 aaPredicted RBP12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 MRPL39Q9NYK5 338 aaKnown RBP12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 LAMC1P11047 1609 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 SPATA31E1Q6ZUB1 1445 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 M0QYT0 321 aa12.58□□□□□ -0.39
SEMA6A-202ENST00000343348 DYNC1LI2O43237 492 aaPredicted RBP12.58□□□□□ -0.39
SEMA6A-202ENST00000343348 CAPN1P07384 714 aa12.58□□□□□ -0.39
SEMA6A-202ENST00000343348 IL5RAQ01344 420 aa12.58□□□□□ -0.39
SEMA6A-202ENST00000343348 PRAMEF18Q5VWM3 479 aa12.58□□□□□ -0.39
SEMA6A-202ENST00000343348 PDPK2PQ6A1A2 396 aa12.58□□□□□ -0.39
SEMA6A-202ENST00000343348 TDRD5Q8NAT2 981 aaKnown RBP12.58□□□□□ -0.39
SEMA6A-202ENST00000343348 B3GALNT2Q8NCR0 500 aa12.58□□□□□ -0.39
SEMA6A-202ENST00000343348 ELMO3Q96BJ8 720 aa12.58□□□□□ -0.39
SEMA6A-202ENST00000343348 HPDLQ96IR7 371 aa12.58□□□□□ -0.39
SEMA6A-202ENST00000343348 TMEM237Q96Q45 408 aa12.58□□□□□ -0.39
SEMA6A-202ENST00000343348 DCUN1D5Q9BTE7 237 aa12.58□□□□□ -0.39
SEMA6A-202ENST00000343348 CINPQ9BW66 212 aaPredicted RBP12.58□□□□□ -0.39
SEMA6A-202ENST00000343348 SMARCAD1Q9H4L7 1026 aa12.58□□□□□ -0.39
SEMA6A-202ENST00000343348 MRPL42Q9Y6G3 142 aaKnown RBP12.58□□□□□ -0.39
SEMA6A-202ENST00000343348 RAP1GAPP47736 663 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 HSPA13P48723 471 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 BFSP2Q13515 415 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 ITIH4Q14624 930 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 DDI2Q5TDH0 399 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 AGAP9Q5VTM2 703 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 TRIM65Q6PJ69 517 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 WDCPQ9H6R7 721 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 CYP27B1O15528 508 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 SOAT2O75908 522 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 ATP6V1G2O95670 118 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 PSMB9P28065 219 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 RCAN1P53805 252 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 CHRNB3Q05901 458 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 AKIRIN2Q53H80 203 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 RSBN1Q5VWQ0 802 aaPredicted RBP12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 C11orf88Q6PI97 169 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 DDI1Q8WTU0 396 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 TMEM121Q9BTD3 319 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 TMBIM4Q9HC24 238 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 PSMC6P62333 389 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 STX5Q13190 355 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 SLC13A5Q86YT5 568 aaPredicted RBP12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 TRPC4APQ8TEL6 797 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.58□□□□□ -0.41e-6■■■■■ 61.5
SEMA6A-202ENST00000343348 C6orf62Q9GZU0 229 aaPredicted RBP12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 VTA1Q9NP79 307 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 DGAT1O75907 488 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 LPCAT2Q7L5N7 544 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 KRT77Q7Z794 578 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 UNC45BQ8IWX7 931 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 PIH1D1Q9NWS0 290 aaKnown RBP12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 UBP1Q9NZI7 540 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 HPS5Q9UPZ3 1129 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 TRIM13O60858 407 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 SPAG6O75602 509 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 ABCB1P08183 1280 aaPredicted RBP12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 THRAP10827 490 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 TPP2P29144 1249 aaPredicted RBP12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 GPC1P35052 558 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 ZNF543Q08ER8 600 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 COX10Q12887 443 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 TRAPPC11Q7Z392 1133 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 ATG16L2Q8NAA4 619 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 NEDD1Q8NHV4 660 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 EFCAB1Q9HAE3 211 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 MTMR4Q9NYA4 1195 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 POLG2Q9UHN1 485 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 MYO5CQ9NQX4 1742 aa12.58□□□□□ -0.4
SEMA6A-202ENST00000343348 RRM2P31350 389 aa12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 NEDD8Q15843 81 aa12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 OTUD3Q5T2D3 398 aaPredicted RBP12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 CACHD1Q5VU97 1274 aa12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 UBASH3BQ8TF42 649 aa12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 CASP10Q92851 521 aa12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 DCDC2Q9UHG0 476 aa12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 CDK12Q9NYV4 1490 aaPredicted RBP12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 A0A1W2PQJ5 194 aa12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 ZBTB7AO95365 584 aa12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 DARSP14868 501 aaKnown RBP12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 MAPK7Q13164 816 aa12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 USP39Q53GS9 565 aaKnown RBP12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 XKR3Q5GH77 459 aa12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 POP1Q99575 1024 aaKnown RBP12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 ROBO2Q9HCK4 1378 aa12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 CDHR2Q9BYE9 1310 aa12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 PEX1O43933 1283 aa12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 ZNF862O60290 1169 aa12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 FGFR2P21802 821 aa12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 PAIP1Q9H074 479 aaKnown RBP12.57□□□□□ -0.4
SEMA6A-202ENST00000343348 VPS33BQ9H267 617 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms