RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 ELP3Q9H9T3 547 aa14.71□□□□□ -0.05
ATP2C1-201ENST00000328560 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.71□□□□□ -0.05
ATP2C1-201ENST00000328560 GPATCH2LQ9NWQ4 482 aa14.71□□□□□ -0.05
ATP2C1-201ENST00000328560 STARD13Q9Y3M8 1113 aa14.71□□□□□ -0.05
ATP2C1-201ENST00000328560 HEY1Q9Y5J3 304 aa14.71□□□□□ -0.05
ATP2C1-201ENST00000328560 C3orf70A6NLC5 250 aaPredicted RBP14.71□□□□□ -0.06
ATP2C1-201ENST00000328560 EDF1O60869 148 aaKnown RBP14.71□□□□□ -0.06
ATP2C1-201ENST00000328560 SURF1Q15526 300 aa14.71□□□□□ -0.06
ATP2C1-201ENST00000328560 C15orf59Q2T9L4 293 aaPredicted RBP14.71□□□□□ -0.06
ATP2C1-201ENST00000328560 LBX2Q6XYB7 198 aa14.71□□□□□ -0.06
ATP2C1-201ENST00000328560 PCGF5Q86SE9 256 aa14.71□□□□□ -0.06
ATP2C1-201ENST00000328560 FBXO16Q8IX29 292 aaPredicted RBP14.71□□□□□ -0.06
ATP2C1-201ENST00000328560 CCDC33Q8N5R6 958 aa14.71□□□□□ -0.06
ATP2C1-201ENST00000328560 MAGEC3Q8TD91 643 aa14.71□□□□□ -0.06
ATP2C1-201ENST00000328560 CFAP36Q96G28 342 aa14.71□□□□□ -0.06
ATP2C1-201ENST00000328560 SENP1Q9P0U3 644 aa14.71□□□□□ -0.06
ATP2C1-201ENST00000328560 USP18Q9UMW8 372 aa14.71□□□□□ -0.06
ATP2C1-201ENST00000328560 PRPF4O43172 522 aaKnown RBP eCLIP14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 MT-ND3P03897 115 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 ELK3P41970 407 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 RAD23BP54727 409 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 BBS12Q6ZW61 710 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 TDRPQ86YL5 185 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 TTC13Q8NBP0 860 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 TTC17Q96AE7 1141 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 SLC24A2Q9UI40 661 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 PCDHGC3Q9UN70 934 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 COL11A1P12107 1806 aaPredicted RBP14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 PSME4Q14997 1843 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 MICAL2O94851 1124 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 PTPN11Q06124 597 aaPredicted RBP14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 RIPK1Q13546 671 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 FYB2Q5VWT5 728 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 XYLT1Q86Y38 959 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 C1orf127Q8N9H9 656 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 CPB2Q96IY4 423 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 RSRC1Q96IZ7 334 aaKnown RBP14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 CDT1Q9H211 546 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 NGRNQ9NPE2 291 aaKnown RBP14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 NOP53Q9NZM5 478 aaKnown RBP14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 SNCAIPQ9Y6H5 919 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 FER1L6Q2WGJ9 1857 aa14.7□□□□□ -0.06
ATP2C1-201ENST00000328560 LACTBL1A8MY62 500 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 H0Y3Z8 333 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 TGFB3P10600 412 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 TAF1BQ53T94 588 aaPredicted RBP14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 EFHC2Q5JST6 749 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 IGDCC3Q8IVU1 814 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 GPC2Q8N158 579 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 ELOVL4Q9GZR5 314 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 GINS2Q9Y248 185 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 FARP1Q9Y4F1 1045 aaPredicted RBP14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 GPR25O00155 361 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 TYROBPO43914 113 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 USP2O75604 605 aaPredicted RBP14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 ATP2A2P16615 1042 aaKnown RBP14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 ZBTB16Q05516 673 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 GJC2Q5T442 439 aaPredicted RBP14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 JADE1Q6IE81 842 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 MTDHQ86UE4 582 aaKnown RBP14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 RIOX2Q8IUF8 465 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 NAT8LQ8N9F0 302 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 FAF2Q96CS3 445 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 WDR83Q9BRX9 315 aaKnown RBP14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 SIX4Q9UIU6 781 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 ACKR2O00590 384 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 PDGFRAP16234 1089 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 KRT81Q14533 505 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 ASRGL1Q7L266 308 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 NLRP9Q7RTR0 991 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 POLNQ7Z5Q5 900 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 CCDC125Q86Z20 511 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 EXOC8Q8IYI6 725 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 NIPA2Q8N8Q9 360 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 RAB3IPQ96QF0 476 aaPredicted RBP14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 GPR20Q99678 358 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 RAB6BQ9NRW1 208 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 ZFP69BQ9UJL9 534 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 WDR81Q562E7 1941 aa14.69□□□□□ -0.06
ATP2C1-201ENST00000328560 DCTN3O75935 186 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 INHBAP08476 426 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 ROR1Q01973 937 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 DPYSL3Q14195 570 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 KLHL38Q2WGJ6 581 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 LRRC6Q86X45 466 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 SLC4A11Q8NBS3 891 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 C2orf40Q9H1Z8 148 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 KAT6AQ92794 2004 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 LTBP3Q9NS15 1303 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 KBTBD13C9JR72 458 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 F5H423 210 aaPredicted RBP14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 LPXNO60711 386 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 IQCF3P0C7M6 154 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 STAG3L1P0CL83 205 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 TROVE2P10155 538 aaKnown RBP eCLIP14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 EPHB2P29323 1055 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 PTK7Q13308 1070 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 ACVR2BQ13705 512 aa14.68□□□□□ -0.06
ATP2C1-201ENST00000328560 MOGSQ13724 837 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms