RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 ZDHHC17Q8IUH5 632 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 EMC1Q8N766 993 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 TMEM209Q96SK2 561 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 PCDHA3Q9Y5H8 950 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 SF3B1O75533 1304 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCDC7-202ENST00000302316 NT5C1B-RDH14C9J2C7 533 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 PGRMC1O00264 195 aaKnown RBP13.67□□□□□ -0.22
CCDC7-202ENST00000302316 PAPSS1O43252 624 aaPredicted RBP13.67□□□□□ -0.22
CCDC7-202ENST00000302316 CAPN15O75808 1086 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 PEX5P50542 639 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 RWDD2BP57060 319 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 WDR5P61964 334 aaKnown RBP13.67□□□□□ -0.22
CCDC7-202ENST00000302316 DEFB103AP81534 67 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 C2orf54Q08AI8 447 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 ZNF211Q13398 564 aaPredicted RBP13.67□□□□□ -0.22
CCDC7-202ENST00000302316 PIGHQ14442 188 aaPredicted RBP13.67□□□□□ -0.22
CCDC7-202ENST00000302316 MAPRE1Q15691 268 aaKnown RBP13.67□□□□□ -0.22
CCDC7-202ENST00000302316 ELF2Q15723 593 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 FAM171A1Q5VUB5 890 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 FAM171BQ6P995 826 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 RSRC2Q7L4I2 434 aaKnown RBP13.67□□□□□ -0.22
CCDC7-202ENST00000302316 SCUBE3Q8IX30 993 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 ACTRT1Q8TDG2 376 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 FNIP1Q8TF40 1166 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 TOP1MTQ969P6 601 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 SMARCD1Q96GM5 515 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 RNPC3Q96LT9 517 aaKnown RBP13.67□□□□□ -0.22
CCDC7-202ENST00000302316 PRKAG2Q9UGJ0 569 aa13.67□□□□□ -0.22
CCDC7-202ENST00000302316 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCDC7-202ENST00000302316 F8VP50 259 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 PSTPIP1O43586 416 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 GRAP2O75791 330 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 GABBR2O75899 941 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 BEST1O76090 585 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 RPL34P49207 117 aaKnown RBP13.66□□□□□ -0.22
CCDC7-202ENST00000302316 SLC6A3Q01959 620 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 ADIGQ0VDE8 80 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 VARS2Q5ST30 1063 aaKnown RBP13.66□□□□□ -0.22
CCDC7-202ENST00000302316 SEL1L2Q5TEA6 688 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 FAM117BQ6P1L5 589 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 FUT10Q6P4F1 479 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 TMCO2Q7Z6W1 182 aaPredicted RBP13.66□□□□□ -0.22
CCDC7-202ENST00000302316 CEP57Q86XR8 500 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 RHOT1Q8IXI2 618 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 RASGEF1CQ8N431 466 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 NIPA2Q8N8Q9 360 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 NOA1Q8NC60 698 aaKnown RBP13.66□□□□□ -0.22
CCDC7-202ENST00000302316 SPATA4Q8NEY3 305 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 PKMYT1Q99640 499 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCDC7-202ENST00000302316 DYNC1I1O14576 645 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 OAZ2O95190 189 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 GPD1P21695 349 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 GJC1P36383 396 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 TAS2R40P59535 323 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 ELAVL2Q12926 359 aaKnown RBP13.66□□□□□ -0.22
CCDC7-202ENST00000302316 CC2D1AQ6P1N0 951 aaPredicted RBP13.66□□□□□ -0.22
CCDC7-202ENST00000302316 TMEM173Q86WV6 379 aaPredicted RBP13.66□□□□□ -0.22
CCDC7-202ENST00000302316 SMOQ99835 787 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 RHOBTB2Q9BYZ6 727 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 GPR62Q9BZJ7 368 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 LRRC4Q9HBW1 653 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 IL23AQ9NPF7 189 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 TMLHEQ9NVH6 421 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 TMEM59LQ9UK28 342 aa13.66□□□□□ -0.22
CCDC7-202ENST00000302316 COL4A6Q14031 1691 aa13.65□□□□□ -0.22
CCDC7-202ENST00000302316 BAIAP3O94812 1187 aa13.65□□□□□ -0.22
CCDC7-202ENST00000302316 BDNFP23560 247 aa13.65□□□□□ -0.22
CCDC7-202ENST00000302316 ALDH7A1P49419 539 aaKnown RBP13.65□□□□□ -0.22
CCDC7-202ENST00000302316 CACNA2D1P54289 1103 aa13.65□□□□□ -0.22
CCDC7-202ENST00000302316 ITIH3Q06033 890 aa13.65□□□□□ -0.22
CCDC7-202ENST00000302316 TAF5Q15542 800 aa13.65□□□□□ -0.22
CCDC7-202ENST00000302316 SPOUT1Q5T280 376 aaKnown RBP13.65□□□□□ -0.22
CCDC7-202ENST00000302316 ZNF280DQ6N043 979 aa13.65□□□□□ -0.22
CCDC7-202ENST00000302316 LRRTM3Q86VH5 581 aa13.65□□□□□ -0.22
CCDC7-202ENST00000302316 SIX6OS1Q8N1H7 587 aa13.65□□□□□ -0.22
CCDC7-202ENST00000302316 CLEC4CQ8WTT0 213 aa13.65□□□□□ -0.22
CCDC7-202ENST00000302316 KCTD13Q8WZ19 329 aa13.65□□□□□ -0.22
CCDC7-202ENST00000302316 B3GALT6Q96L58 329 aa13.65□□□□□ -0.22
CCDC7-202ENST00000302316 C2CD4BA6NLJ0 364 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 FGGP02679 453 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 OR4Q2P0C623 313 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 PDGFRAP16234 1089 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 FGFR3P22607 806 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 FLT3P36888 993 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 RABGGTBP53611 331 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 TUBB4BP68371 445 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 CTXN3Q4LDR2 81 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 AADACL2Q6P093 401 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 C4orf50Q6ZRC1 276 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 OTOP2Q7RTS6 562 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 SPATA2LQ8IUW3 424 aaPredicted RBP13.64□□□□□ -0.23
CCDC7-202ENST00000302316 BCL7CQ8WUZ0 217 aaPredicted RBP13.64□□□□□ -0.23
CCDC7-202ENST00000302316 RXFP2Q8WXD0 754 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 KCNK16Q96T55 309 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 PLVAPQ9BX97 442 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 CWH43Q9H720 699 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 RBM12Q9NTZ6 932 aaKnown RBP13.64□□□□□ -0.23
CCDC7-202ENST00000302316 TMEM30AQ9NV96 361 aa13.64□□□□□ -0.23
CCDC7-202ENST00000302316 TTC7AQ9ULT0 858 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms