RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 SMTNL2Q2TAL5 461 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 KCNT1Q5JUK3 1230 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 KAZNQ674X7 775 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 SPOCD1Q6ZMY3 1216 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 PGBD4Q96DM1 585 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 SNX24Q9Y343 169 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 PDGFRAP16234 1089 aa16.61■□□□□ 0.25
VPS26A-201ENST00000263559 PTPN1P18031 435 aaKnown RBP16.61■□□□□ 0.25
VPS26A-201ENST00000263559 RPL9P32969 192 aaKnown RBP16.61■□□□□ 0.25
VPS26A-201ENST00000263559 ACAP1Q15027 740 aa16.61■□□□□ 0.25
VPS26A-201ENST00000263559 HADHQ16836 314 aaKnown RBP16.61■□□□□ 0.25
VPS26A-201ENST00000263559 ODF2Q5BJF6 829 aa16.61■□□□□ 0.25
VPS26A-201ENST00000263559 SH3PXD2AQ5TCZ1 1133 aa16.61■□□□□ 0.25
VPS26A-201ENST00000263559 RTN4RL1Q86UN2 441 aaPredicted RBP16.61■□□□□ 0.25
VPS26A-201ENST00000263559 ECHDC2Q86YB7 292 aa16.61■□□□□ 0.25
VPS26A-201ENST00000263559 KHSRPQ92945 711 aaKnown RBP eCLIP16.61■□□□□ 0.251e-8■□□□□ 9.6
VPS26A-201ENST00000263559 FAM118BQ9BPY3 351 aa16.61■□□□□ 0.25
VPS26A-201ENST00000263559 ASNSD1Q9NWL6 643 aa16.61■□□□□ 0.25
VPS26A-201ENST00000263559 PCSK1NQ9UHG2 260 aa16.61■□□□□ 0.25
VPS26A-201ENST00000263559 TIMM13Q9Y5L4 95 aaPredicted RBP16.61■□□□□ 0.25
VPS26A-201ENST00000263559 LRRD1A4D1F6 860 aa16.61■□□□□ 0.25
VPS26A-201ENST00000263559 ARVCFO00192 962 aa16.61■□□□□ 0.25
VPS26A-201ENST00000263559 RNF8O76064 485 aa16.61■□□□□ 0.25
VPS26A-201ENST00000263559 CDR1P51861 262 aa16.61■□□□□ 0.25
VPS26A-201ENST00000263559 DRG2P55039 364 aaKnown RBP16.61■□□□□ 0.25
VPS26A-201ENST00000263559 KIAA0319Q5VV43 1072 aa16.61■□□□□ 0.25
VPS26A-201ENST00000263559 DSTYKQ6XUX3 929 aa16.61■□□□□ 0.25
VPS26A-201ENST00000263559 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.61■□□□□ 0.25
VPS26A-201ENST00000263559 INPP5FQ9Y2H2 1132 aa16.61■□□□□ 0.25
VPS26A-201ENST00000263559 AGPSO00116 658 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 KRT7P08729 469 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 SKIP12755 728 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 MIPP30301 263 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 AARSP49588 968 aaKnown RBP eCLIP16.6■□□□□ 0.25
VPS26A-201ENST00000263559 SNX16P57768 344 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 COPS2P61201 443 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 C15orf59Q2T9L4 293 aaPredicted RBP16.6■□□□□ 0.25
VPS26A-201ENST00000263559 RAB6CQ53S08 254 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 ZNF598Q86UK7 904 aaKnown RBP16.6■□□□□ 0.25
VPS26A-201ENST00000263559 FUKQ8N0W3 1084 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 SLCO2A1Q92959 643 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 HNRNPABQ99729 332 aaKnown RBP16.6■□□□□ 0.25
VPS26A-201ENST00000263559 CNPY3Q9BT09 278 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 RAB6CQ9H0N0 254 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 SAGE1Q9NXZ1 904 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 DDX43Q9NXZ2 648 aaKnown RBP16.6■□□□□ 0.25
VPS26A-201ENST00000263559 PHF24Q9UPV7 400 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 C3orf70A6NLC5 250 aaPredicted RBP16.6■□□□□ 0.25
VPS26A-201ENST00000263559 CLDN5O00501 218 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 ECEL1O95672 775 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 CDKN2BP42772 138 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 RPL34P49207 117 aaKnown RBP16.6■□□□□ 0.25
VPS26A-201ENST00000263559 CCNG2Q16589 344 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 MREGQ8N565 214 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 CLEC4CQ8WTT0 213 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 UBN1Q9NPG3 1134 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 RGS18Q9NS28 235 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 USP18Q9UMW8 372 aa16.6■□□□□ 0.25
VPS26A-201ENST00000263559 hCG_1818297A0A087WSY0 165 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 KBTBD13C9JR72 458 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 TRUB2O95900 331 aaKnown RBP16.59■□□□□ 0.25
VPS26A-201ENST00000263559 LCP1P13796 627 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 GGCXP38435 758 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 RPL21P46778 160 aaKnown RBP16.59■□□□□ 0.25
VPS26A-201ENST00000263559 FAM193AP78312 1265 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 CCDC14Q49A88 953 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 TIGD5Q53EQ6 642 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 TFDP3Q5H9I0 405 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 PAQR9Q6ZVX9 377 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 ZDHHC17Q8IUH5 632 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 CFAP57Q96MR6 1250 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 HOMER3Q9NSC5 361 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 GRHL1Q9NZI5 618 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.59■□□□□ 0.25
VPS26A-201ENST00000263559 GOLGA6BA6NDN3 693 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 POLR3GO15318 223 aaPredicted RBP16.59■□□□□ 0.25
VPS26A-201ENST00000263559 TJP3O95049 919 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 SYF2O95926 243 aaKnown RBP16.59■□□□□ 0.25
VPS26A-201ENST00000263559 PTPN7P35236 360 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 PCK1P35558 622 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 GRIK3Q13003 919 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 CDO1Q16878 200 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 MDH1BQ5I0G3 518 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 TMEM86AQ8N2M4 240 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 DUSP16Q9BY84 665 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 UNC93B1Q9H1C4 597 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 ZDHHC18Q9NUE0 388 aa16.59■□□□□ 0.25
VPS26A-201ENST00000263559 MYCP01106 439 aaPredicted RBP16.58■□□□□ 0.25
VPS26A-201ENST00000263559 KDELR1P24390 212 aa16.58■□□□□ 0.25
VPS26A-201ENST00000263559 HSPA9P38646 679 aaKnown RBP16.58■□□□□ 0.25
VPS26A-201ENST00000263559 LHX1P48742 406 aa16.58■□□□□ 0.25
VPS26A-201ENST00000263559 ATP11AP98196 1134 aa16.58■□□□□ 0.25
VPS26A-201ENST00000263559 KRT17Q04695 432 aa16.58■□□□□ 0.25
VPS26A-201ENST00000263559 PPP1R7Q15435 360 aa16.58■□□□□ 0.25
VPS26A-201ENST00000263559 PAN2Q504Q3 1202 aaKnown RBP16.58■□□□□ 0.25
VPS26A-201ENST00000263559 ATL2Q8NHH9 583 aa16.58■□□□□ 0.25
VPS26A-201ENST00000263559 RIN2Q8WYP3 895 aaPredicted RBP16.58■□□□□ 0.25
VPS26A-201ENST00000263559 PEBP4Q96S96 227 aa16.58■□□□□ 0.25
VPS26A-201ENST00000263559 CRTAC1Q9NQ79 661 aa16.58■□□□□ 0.25
VPS26A-201ENST00000263559 C9IYK1 514 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms