RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 ZBTB6Q15916 424 aa18.59■□□□□ 0.57
SSB-201ENST00000260956 DCAF4L1Q3SXM0 396 aa18.59■□□□□ 0.57
SSB-201ENST00000260956 NLRP7Q8WX94 980 aa18.59■□□□□ 0.57
SSB-201ENST00000260956 RAPGEF5Q92565 580 aa18.59■□□□□ 0.57
SSB-201ENST00000260956 TMEM176AQ96HP8 235 aa18.59■□□□□ 0.57
SSB-201ENST00000260956 HPDLQ96IR7 371 aa18.59■□□□□ 0.57
SSB-201ENST00000260956 FAM49AQ9H0Q0 323 aaPredicted RBP18.59■□□□□ 0.57
SSB-201ENST00000260956 GOLGA6L10A6NI86 522 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 PI4K2BG5E9Z4 385 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 LIASO43766 372 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 LRCH4O75427 683 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 CHRNA1P02708 482 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 KRT1P04264 644 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 CTSHP09668 335 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 ACRP10323 421 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 LSP1P33241 339 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 CHKAP35790 457 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 GPD2P43304 727 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 SLC29A2Q14542 456 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 CNGA2Q16280 664 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 TCTN1Q2MV58 587 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 KRT71Q3SY84 523 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 SNX27Q96L92 541 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 DERAQ9Y315 318 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 CEP83Q9Y592 693 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 NME7Q9Y5B8 376 aa18.58■□□□□ 0.57
SSB-201ENST00000260956 CHD9Q3L8U1 2897 aa18.58■□□□□ 0.56
SSB-201ENST00000260956 NBNO60934 754 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 CAND2O75155 1236 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 GAS8O95995 478 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 PFKMP08237 780 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 CD19P15391 556 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 FGFR4P22455 802 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 IL1R2P27930 398 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 GUCY1A3Q02108 690 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 TMEM62Q0P6H9 643 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 BFSP2Q13515 415 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 ZNF268Q14587 947 aaPredicted RBP18.57■□□□□ 0.56
SSB-201ENST00000260956 OASLQ15646 514 aaKnown RBP18.57■□□□□ 0.56
SSB-201ENST00000260956 C9orf50Q5SZB4 431 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 DENND2CQ68D51 928 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 TTC19Q6DKK2 380 aaPredicted RBP18.57■□□□□ 0.56
SSB-201ENST00000260956 TRMT10CQ7L0Y3 403 aaKnown RBP18.57■□□□□ 0.56
SSB-201ENST00000260956 CCDC50Q8IVM0 306 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 NKD2Q969F2 451 aaPredicted RBP18.57■□□□□ 0.56
SSB-201ENST00000260956 ZMAT2Q96NC0 199 aaKnown RBP18.57■□□□□ 0.56
SSB-201ENST00000260956 ACAP3Q96P50 834 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 LBHD1Q9BQE6 289 aaPredicted RBP18.57■□□□□ 0.56
SSB-201ENST00000260956 DPP3Q9NY33 737 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 WDR35Q9P2L0 1181 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 BARX2Q9UMQ3 279 aaPredicted RBP18.57■□□□□ 0.56
SSB-201ENST00000260956 AGAP1Q9UPQ3 857 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 TET1Q8NFU7 2136 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 VDRP11473 427 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 KRT10P13645 584 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 SELPP16109 830 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 GJC1P36383 396 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 RBP5P82980 135 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 CCDC142Q17RM4 750 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 KIZQ2M2Z5 673 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 PKDCCQ504Y2 493 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 DCUN1D2Q6PH85 259 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 LRRC8DQ7L1W4 858 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 RELL1Q8IUW5 271 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 FAM118BQ9BPY3 351 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 CDC42EP4Q9H3Q1 356 aaKnown RBP18.57■□□□□ 0.56
SSB-201ENST00000260956 PLEKHA5Q9HAU0 1116 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 CDHR5Q9HBB8 845 aa18.57■□□□□ 0.56
SSB-201ENST00000260956 DDX56Q9NY93 547 aaKnown RBP18.57■□□□□ 0.56
SSB-201ENST00000260956 FEZ2Q9UHY8 353 aaPredicted RBP18.57■□□□□ 0.56
SSB-201ENST00000260956 SCN5AQ14524 2016 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 SMIM35A0A1B0GVV1 85 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 ITGA8P53708 1063 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 CAV1Q03135 178 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 FPGSQ05932 587 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 MGAT3Q09327 533 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 TRNP1Q6NT89 227 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 TAF2Q6P1X5 1199 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 ALKAL1Q6UXT8 129 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 CYP4V2Q6ZWL3 525 aaPredicted RBP18.56■□□□□ 0.56
SSB-201ENST00000260956 DEFB128Q7Z7B8 93 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 RPAINQ86UA6 219 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 HOOK3Q86VS8 718 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 ARFGAP2Q8N6H7 521 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 ADAM7Q9H2U9 754 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 ASIC3Q9UHC3 531 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 NOVA2Q9UNW9 492 aaKnown RBP18.56■□□□□ 0.56
SSB-201ENST00000260956 EFR3BQ9Y2G0 817 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 CHD7Q9P2D1 2997 aa18.56■□□□□ 0.56
SSB-201ENST00000260956 PPEF2O14830 753 aa18.55■□□□□ 0.56
SSB-201ENST00000260956 ATF2P15336 505 aa18.55■□□□□ 0.56
SSB-201ENST00000260956 NDST1P52848 882 aa18.55■□□□□ 0.56
SSB-201ENST00000260956 PSMC1P62191 440 aaKnown RBP18.55■□□□□ 0.56
SSB-201ENST00000260956 PPP2R2AP63151 447 aa18.55■□□□□ 0.56
SSB-201ENST00000260956 CALCOCO2Q13137 446 aa18.55■□□□□ 0.56
SSB-201ENST00000260956 SHHQ15465 462 aa18.55■□□□□ 0.56
SSB-201ENST00000260956 HIBCHQ6NVY1 386 aaPredicted RBP18.55■□□□□ 0.56
SSB-201ENST00000260956 LCLAT1Q6UWP7 414 aa18.55■□□□□ 0.56
SSB-201ENST00000260956 TMEM199Q8N511 208 aa18.55■□□□□ 0.56
SSB-201ENST00000260956 GLIS1Q8NBF1 620 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms