RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 EPHA5P54756 1037 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 SLC8A3P57103 927 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 CDK17Q00537 523 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 FMO1Q01740 532 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 ITIH3Q06033 890 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 PDE4CQ08493 712 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 TWF1Q12792 350 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 RAB41Q5JT25 222 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 TC2NQ8N9U0 490 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 CPLX3Q8WVH0 158 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 KCTD13Q8WZ19 329 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 PSMG2Q969U7 264 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 TRMT2BQ96GJ1 504 aaKnown RBP14.92□□□□□ -0.02
VPS25-201ENST00000253794 MYRFLQ96LU7 910 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 TTLL2Q9BWV7 592 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 S1PR5Q9H228 398 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 AVENQ9NQS1 362 aaPredicted RBP14.92□□□□□ -0.02
VPS25-201ENST00000253794 ABHD10Q9NUJ1 306 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 CLDND1Q9NY35 253 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 PATJQ8NI35 1801 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 XIRP2A4UGR9 3374 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 M0QYV0 167 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 XYLBO75191 536 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 SOAT2O75908 522 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 CYP1A1P04798 512 aaPredicted RBP14.91□□□□□ -0.02
VPS25-201ENST00000253794 SERPING1P05155 500 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 CFHP08603 1231 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 CSH1P0DML2 217 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 CSH2P0DML3 217 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 FECHP22830 423 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 ANXA13P27216 316 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 GPR15P49685 360 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 EPHB3P54753 998 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 MAP3K7CLP57077 242 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 DLX2Q07687 328 aaPredicted RBP14.91□□□□□ -0.02
VPS25-201ENST00000253794 DDR2Q16832 855 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 DENND1BQ6P3S1 775 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 WDR59Q6PJI9 974 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 TRIM72Q6ZMU5 477 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 DENND5BQ6ZUT9 1274 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 GPR149Q86SP6 731 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 ITIH5Q86UX2 942 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 SCN4BQ8IWT1 228 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 SCML4Q8N228 414 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 MICALL1Q8N3F8 863 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 WDTC1Q8N5D0 677 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 SLC20A1Q8WUM9 679 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 HSFY1Q96LI6 401 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 KCNK16Q96T55 309 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 AGPAT1Q99943 283 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 LRRC3Q9BY71 257 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 ADAM7Q9H2U9 754 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 UBE2ZQ9H832 354 aaPredicted RBP14.91□□□□□ -0.02
VPS25-201ENST00000253794 COG5Q9UP83 839 aa14.91□□□□□ -0.02
VPS25-201ENST00000253794 CCDC195A0A1B0GUA6 201 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 RTN3O95197 1032 aaPredicted RBP14.9□□□□□ -0.02
VPS25-201ENST00000253794 MMEP08473 750 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 HMGA1P17096 107 aaKnown RBP14.9□□□□□ -0.02
VPS25-201ENST00000253794 ADKP55263 362 aaKnown RBP14.9□□□□□ -0.02
VPS25-201ENST00000253794 ARID5AQ03989 594 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 KLHL30Q0D2K2 578 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 VEPH1Q14D04 833 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 PIGZQ86VD9 579 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 TMC8Q8IU68 726 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 NUP93Q8N1F7 819 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 ELMOD1Q8N336 334 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 LEMD2Q8NC56 503 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 SMRP1Q8NCR6 262 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 SECISBP2LQ93073 1101 aaKnown RBP14.9□□□□□ -0.02
VPS25-201ENST00000253794 PANX2Q96RD6 677 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 SLC4A5Q9BY07 1137 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 HAUS4Q9H6D7 363 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 EHD2Q9NZN4 543 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 USP3Q9Y6I4 520 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 BRWD1Q9NSI6 2320 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 NCANO14594 1321 aa14.9□□□□□ -0.02
VPS25-201ENST00000253794 SSU72P8A0A1W2PR75 194 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 SLC38A8A6NNN8 435 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 TULP2O00295 520 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 CCL16O15467 120 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 CDR1P51861 262 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 KIF11P52732 1056 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 SLC5A3P53794 718 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 NOMO3P69849 1222 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 CENPCQ03188 943 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 PDCLQ13371 301 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 MAPK8IP2Q13387 824 aaPredicted RBP14.89□□□□□ -0.03
VPS25-201ENST00000253794 PMF1Q6P1K2 205 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 ZNF571Q7Z3V5 609 aaPredicted RBP14.89□□□□□ -0.03
VPS25-201ENST00000253794 DNAJB7Q7Z6W7 309 aaPredicted RBP14.89□□□□□ -0.03
VPS25-201ENST00000253794 TMEM110Q86TL2 294 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 TMEM35BQ8NCS4 154 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 MAFAQ8NHW3 353 aaPredicted RBP14.89□□□□□ -0.03
VPS25-201ENST00000253794 SLC30A5Q8TAD4 765 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 UBA3Q8TBC4 463 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 OVCA2Q8WZ82 227 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 SUSD6Q92537 303 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 ZNF512Q96ME7 567 aaPredicted RBP14.89□□□□□ -0.03
VPS25-201ENST00000253794 PCDHB18PQ96TA0 734 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 ARHGAP20Q9P2F6 1191 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms