RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Churc1Q6DG52 112 aa8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Fam107aQ78TU8 144 aa8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 PicalmQ7M6Y3 660 aaKnown RBP8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Fam185aQ7TPD2 378 aa8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Azin2Q8BVM4 459 aa8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Apol7cQ8C6E1 369 aa8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Zfp263Q8CF60 680 aa8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Dhx36Q8VHK9 1001 aaKnown RBP8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Rtfdc1Q99K95 307 aa8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Tlr3Q99MB1 905 aa8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Mxra7Q9CZH7 178 aa8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Cmtm5Q9D6G9 156 aa8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Ybx3Q9JKB3 361 aaKnown RBP8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Acsl4Q9QUJ7 711 aa8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Tbk1Q9WUN2 729 aa8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Extl3Q9WVL6 918 aa8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Ttc6G3UYY4 1857 aa8.63□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Cdr1E9Q0B4 517 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Gm21833J3QPK1 500 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 ChkaO54804 453 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 AlplP09242 524 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Uchl4P58321 233 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Naa20P61600 178 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Cntn3Q07409 1028 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Ece1Q4PZA2 769 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Arhgap30Q640N3 1101 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Acap2Q6ZQK5 770 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Crybg3Q80W49 1005 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Q80ZQ3 298 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Creb3l2Q8BH52 521 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Gimap5Q8BWF2 308 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Trim60Q8VI40 466 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Fam192aQ91WE2 254 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 1700123K08RikQ9D991 295 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Tm9sf1Q9DBU0 606 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Hey1Q9WV93 299 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Crlf3Q9Z2L7 442 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Fer1l6E0CZ42 1862 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Tmem45a2B7ZWJ5 289 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Ppp1r36D3Z0R2 411 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Ccdc74aE9Q9U8 364 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 NumblO08919 604 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Shoc2O88520 582 aaKnown RBP8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Slurp2P0DP59 97 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Rab20P35295 233 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 VdrP48281 422 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Cacnb3P54285 484 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Tigd5Q499M4 642 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Lrrc8bQ5DU41 803 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Capn3Q64691 821 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Q8BGN9 141 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Lrif1Q8CDD9 755 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Vps37bQ8R0J7 285 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 St5Q924W7 1134 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Anxa9Q9JHQ0 345 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Pdzd4Q9QY39 772 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Pck1Q9Z2V4 622 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Scn9aQ62205 1984 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Lonrf1D3YY23 762 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Bcl7cO08664 217 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Srpk1O70551 648 aaKnown RBP8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Ccnd2P30280 289 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Rhox5P52651 210 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Rit2P70425 217 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Ncf1Q09014 390 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Mylk3Q3UIZ8 795 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Stxbp5lQ5DQR4 1185 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Nell2Q61220 819 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Itih2Q61703 946 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Nuak1Q641K5 658 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Best3Q6H1V1 669 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Trnau1apQ80VC6 287 aaKnown RBP8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Ticam2Q8BJQ4 232 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Pkn2Q8BWW9 983 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Sike1Q9CPR7 207 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Sv2aQ9JIS5 742 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Pdk2Q9JK42 407 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Prkab1Q9R078 270 aa8.62□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Vti1aO89116 217 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 ZfxP17012 799 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Hoxa11P31311 313 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Tlr8P58682 1032 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Stx2Q00262 289 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 E2f8Q58FA4 860 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Smarcal1Q8BJL0 910 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Rtp1Q8C8C1 263 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Tgif2lx2Q8K5B9 231 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Olfr809Q8VEX8 328 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Rpa3Q9CQ71 121 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Leng1Q9DB98 261 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Ddx24Q9ESV0 857 aaKnown RBP8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Actl7bQ9QY83 418 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Lbhd1A0A087WPA0 259 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Spata31d1dE9Q5W2 1247 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Usp17lbE9Q9U0 468 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Gm340F6RGI3 1242 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Dusp8O09112 663 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Serpini1O35684 410 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Drg1P32233 367 aaKnown RBP8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Mmp13P33435 472 aa8.61□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms