RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Elac2Q80Y81 831 aaKnown RBP10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 LzicQ8K3C3 190 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Pdxdc1Q99K01 787 aaKnown RBP10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Ndufaf1Q9CWX2 328 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Fam187aQ9D3R5 417 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Gtf2h1Q9DBA9 547 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Cyp2s1Q9DBX6 501 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Fads3Q9JJE7 449 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Neu2Q9JMH3 379 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Grk1Q9WVL4 564 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Cyp2b10P12791 500 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 S100a9P31725 113 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Msh2P43247 935 aaKnown RBP10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Lzts1P60853 599 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Plk1Q07832 603 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Rnf113a2Q14B01 337 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Trim75Q3UWZ0 467 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Garem2Q6PAJ3 880 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Celf6Q7TN33 460 aaKnown RBP10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Dnajc6Q80TZ3 938 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Pdk1Q8BFP9 434 aaKnown RBP10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Btbd9Q8C726 612 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Zswim7Q9CWQ2 152 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Kcnd2Q9Z0V2 630 aa10.31□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Zfp558E9Q1J0 407 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Gm2237E9Q501 211 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Cyp4f17G3UW78 524 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Gm3591K7N6X2 186 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Gsta3P30115 221 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Ccr1P51675 355 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Klrb1Q0ZUP1 214 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Cdca2Q14B71 982 aaKnown RBP10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 StilQ60988 1262 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Q6GQU0 248 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Dclk2Q6PGN3 756 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Gpr180Q8BPS4 441 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Trim35Q8C006 501 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Ccdc134Q8C7V8 229 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 ItchQ8C863 864 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Snx30Q8CE50 437 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 TgdsQ8VDR7 355 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Ndfip2Q91ZP6 311 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Cyp4f16Q99N17 524 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Micu3Q9CTY5 523 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Ten1Q9D7K2 161 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Nudt5Q9JKX6 218 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Apoa4P06728 395 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 M6prP24668 278 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Bpifb5Q3UQ05 490 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Fam160a1Q505K2 1081 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 A1cfQ5YD48 595 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 XiapQ60989 496 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Moxd2Q7TT41 619 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Q80WR5 230 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Camkk2Q8C078 588 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 D630039A03RikQ8K0M7 236 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Tagln3Q9R1Q8 199 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mup10A2BIN1 180 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mup14A2CEK7 180 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mup19A9C497 187 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mup15A9R9W0 180 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mup17B5X0G2 180 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mup8E9PVW0 235 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mup7E9QA79 235 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Srp72F8VQC1 671 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Gm3402K7N5P2 326 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mup6P02762 180 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mup1P11588 180 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mup2P11589 180 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Samd11Q1RNF8 542 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Lrrc14bQ3UJB3 510 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Nsun6Q7TS68 476 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Q8BGC1 442 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Cdkn2aipQ8BI72 563 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Rccd1Q8BTU7 377 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Cnbd2Q9D5U8 673 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Gid8Q9D7M1 228 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Psmd12Q9D8W5 456 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Ropn1Q9ESG2 212 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Rbck1Q9WUB0 508 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Nme3Q9WV85 169 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Atp8b4A2ANX3 1194 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Rap1gds1E9Q912 607 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Itgb5O70309 798 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Adam15O88839 864 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Hoxc6P10629 235 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Cdh2P15116 906 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Hoxa11P31311 313 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Fmr1P35922 614 aaKnown RBP10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Tbx3P70324 741 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 CiitaP79621 1155 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Syce1lQ5D525 247 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Bcap29Q61334 240 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Parp6Q6P6P7 630 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Naif1Q6PFD7 327 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 DcstampQ7TNJ0 470 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Tas2r134Q7TQB0 298 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Pwp2Q8BU03 919 aaKnown RBP10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Dnali1Q8BVN8 258 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Sgsm3Q8VCZ6 750 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms