RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Vmn2r26Q6TAC4 855 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 PmpcbQ9CXT8 489 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Cul2Q9D4H8 745 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Dpp7Q9ET22 506 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Sh2b2Q9JID9 621 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ptf1aQ9QX98 324 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Apobec2Q9WV35 224 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Atp6v1c1Q9Z1G3 382 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Fam171a2A2A699 822 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ssxb9A2BI93 185 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ttll6A4Q9E8 822 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Top3aO70157 1003 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 RnaselQ05921 735 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Tfdp1Q08639 410 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Gm29609Q3UU56 907 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Styk1Q6J9G1 429 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Raver2Q7TPD6 673 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Gtf3c2Q8BL74 907 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Q8CD60 292 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Slc14a1Q8VHL0 384 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Necab2Q91ZP9 389 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Tomm20lQ9D4V6 152 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Dkc1Q9ESX5 509 aaKnown RBP13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Msh5Q9QUM7 833 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Tk2Q9R088 270 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Vav3Q9R0C8 847 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Morf4l2Q9R0Q4 288 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Wdr46Q9Z0H1 622 aaKnown RBP13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Klhl18A0A0G2JGN5 579 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Kpna7C0LLJ0 499 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Magea4F2Z493 315 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 StrnO55106 780 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 SfnO70456 248 aaKnown RBP13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ugt3a1Q3UP75 523 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Acvrl1Q61288 502 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Tfdp2Q64163 446 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Rnf220Q6PDX6 566 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Thnsl1Q8BH55 747 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Pih1d1Q9CQJ2 290 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 BlvraQ9CY64 295 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Gpatch1Q9DBM1 930 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Olig1Q9JKN5 260 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Gm44511A0A0N4SW10 223 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Gm6657A0A1B0GRJ3 277 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 GabreA2AMW3 916 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Maml3D4QGC2 1135 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Zfp275G3X904 499 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Hspa4lP48722 838 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 PrkcbP68404 671 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 CiitaP79621 1155 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 RenbpP82343 430 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Spink5Q148R4 1017 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Alkbh5Q3TSG4 395 aaKnown RBP13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Slc17a7Q3TXX4 560 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Adamts18Q4VC17 1219 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Krt32Q62168 407 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Sept10Q8C650 452 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Agr3Q8R3W7 165 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 BrdtQ91Y44 956 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Gdap2Q9DBL2 498 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Dgcr8Q9EQM6 773 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Stk32bQ9JJX8 414 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ttc7bE9Q6P5 843 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Magea6O89010 325 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 En2P09066 324 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Fam167bP17257 162 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Lsg1Q3UM18 644 aaKnown RBP13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Znf583Q3V080 568 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Gm13103Q4VAD2 491 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Grid1Q61627 1009 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 CapslQ6P8Y1 208 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Magea3Q6T340 320 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Olfml3Q8BK62 406 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Tcaf1Q8BNE1 924 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Robo4Q8C310 1012 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Strip2Q8C9H6 844 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Kdm1bQ8CIG3 826 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Pcdhgb1Q91XX8 918 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Q9CPS8 106 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Doc2gQ9ESN1 387 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Mcf2A2AEU1 1111 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ace3D0G895 737 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Adam7O35227 789 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 DcxO88809 366 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ccdc153P0C7Q1 202 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Cd68P31996 326 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Mxi1P50540 228 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 NrlP54846 237 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Grik1Q60934 836 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Papd5Q68ED3 633 aaKnown RBP13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 DgkqQ6P5E8 934 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 HltfQ6PCN7 1003 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Q80WR5 230 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Prr33Q8C494 260 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Gga1Q8R0H9 635 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Polr3hQ9D2C6 204 aaKnown RBP13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 MrgbpQ9DAT2 204 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ndufa13Q9ERS2 144 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Znf354bQ9QXT9 601 aa13.24□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Kif13bA0A286YCV9 1847 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms