RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 TY1B-GR2Q12269 1755 aa-2.97□□□□□ -2.88
snR38snR38 TY1B-OLQ12273 1755 aa-2.97□□□□□ -2.88
snR38snR38 TY1B-PLQ12414 1755 aaKnown RBP-2.97□□□□□ -2.88
snR38snR38 TY1B-ORQ92393 1755 aa-2.97□□□□□ -2.88
snR38snR38 TY1B-DR3Q99231 1755 aa-2.97□□□□□ -2.88
snR38snR38 YKL044WP36092 106 aa-2.97□□□□□ -2.88
snR38snR38 NVJ1P38881 321 aa-2.97□□□□□ -2.88
snR38snR38 YNL140CP53910 189 aa-2.97□□□□□ -2.88
snR38snR38 YPD1Q07688 167 aa-2.98□□□□□ -2.89
snR38snR38 RPS28AQ3E7X9 67 aaPredicted RBP-2.98□□□□□ -2.89
snR38snR38 TOP2P06786 1428 aaKnown RBP-2.99□□□□□ -2.89
snR38snR38 CAT8P39113 1433 aa-2.99□□□□□ -2.89
snR38snR38 SEC72P39742 193 aaKnown RBP-2.99□□□□□ -2.89
snR38snR38 GRX8Q05926 109 aa-2.99□□□□□ -2.89
snR38snR38 YET3Q07451 203 aa-3□□□□□ -2.89
snR38snR38 HSP10P38910 106 aa-3.01□□□□□ -2.89
snR38snR38 MRPS17Q03246 237 aaPredicted RBP-3.01□□□□□ -2.89
snR38snR38 BPH1P25356 2167 aa-3.01□□□□□ -2.89
snR38snR38 ECM12O13529 151 aa-3.02□□□□□ -2.89
snR38snR38 PAU21P0CE86 164 aa-3.02□□□□□ -2.89
snR38snR38 PAU22P0CE87 164 aa-3.02□□□□□ -2.89
snR38snR38 PDX3P38075 228 aaKnown RBP-3.02□□□□□ -2.89
snR38snR38 EGD2P38879 174 aaKnown RBP-3.02□□□□□ -2.89
snR38snR38 MIC10Q96VH5 97 aa-3.02□□□□□ -2.89
snR38snR38 YLR118CQ12354 227 aa-3.03□□□□□ -2.89
snR38snR38 YRF1-1P0CX20 1796 aa-3.04□□□□□ -2.9
snR38snR38 YRF1-5P0CX21 1796 aa-3.04□□□□□ -2.9
snR38snR38 YRF1-8P0CX22 1796 aa-3.04□□□□□ -2.9
snR38snR38 LSM8P47093 109 aaKnown RBP-3.04□□□□□ -2.9
snR38snR38 SDH7Q04401 133 aa-3.04□□□□□ -2.9
snR38snR38 PET54P10834 293 aa-3.05□□□□□ -2.9
snR38snR38 CYB5P40312 120 aa-3.05□□□□□ -2.9
snR38snR38 RPL38P49167 78 aaKnown RBP-3.05□□□□□ -2.9
snR38snR38 YLR285C-AQ3E771 56 aa-3.06□□□□□ -2.9
snR38snR38 YKR041WP36134 250 aa-3.07□□□□□ -2.9
snR38snR38 YBL044WP38194 122 aa-3.07□□□□□ -2.9
snR38snR38 LSM1P47017 172 aaKnown RBP-3.07□□□□□ -2.9
snR38snR38 ORM1P53224 222 aa-3.07□□□□□ -2.9
snR38snR38 SHG1P38337 142 aa-3.08□□□□□ -2.9
snR38snR38 DLS1P40366 167 aa-3.08□□□□□ -2.9
snR38snR38 YCL012CQ8J0M4 134 aa-3.08□□□□□ -2.9
snR38snR38 QCR7P00128 127 aa-3.09□□□□□ -2.9
snR38snR38 CBF1P17106 351 aa-3.09□□□□□ -2.9
snR38snR38 YER181CP40097 107 aa-3.09□□□□□ -2.9
snR38snR38 YOR097CQ12274 175 aaPredicted RBP-3.09□□□□□ -2.9
snR38snR38 RAD50P12753 1312 aa-3.1□□□□□ -2.91
snR38snR38 SEC59P20048 519 aa-3.1□□□□□ -2.91
snR38snR38 RPC19P28000 142 aaKnown RBP-3.1□□□□□ -2.91
snR38snR38 QCR10P37299 77 aa-3.1□□□□□ -2.91
snR38snR38 RGI1P40043 161 aaPredicted RBP-3.1□□□□□ -2.91
snR38snR38 RPL30P14120 105 aaKnown RBP-3.11□□□□□ -2.91
snR38snR38 HSP12P22943 109 aaKnown RBP-3.11□□□□□ -2.91
snR38snR38 PGA2P53903 129 aa-3.11□□□□□ -2.91
snR38snR38 SLO1Q3E784 85 aa-3.11□□□□□ -2.91
snR38snR38 RPO21P04050 1733 aaKnown RBP-3.11□□□□□ -2.91
snR38snR38 LSM3P57743 89 aaKnown RBP-3.12□□□□□ -2.91
snR38snR38 YDR476CQ03362 224 aa-3.12□□□□□ -2.91
snR38snR38 RPL14AP36105 138 aaKnown RBP-3.13□□□□□ -2.91
snR38snR38 YIL014C-AQ02598 104 aa-3.13□□□□□ -2.91
snR38snR38 MMS1Q06211 1407 aa-3.13□□□□□ -2.91
snR38snR38 CMD1P06787 147 aaKnown RBP-3.14□□□□□ -2.91
snR38snR38 YJL197C-AP0C5P0 93 aa-3.14□□□□□ -2.91
snR38snR38 ROX3P25046 220 aa-3.14□□□□□ -2.91
snR38snR38 TRS20P38334 175 aa-3.14□□□□□ -2.91
snR38snR38 IMP2P46972 177 aa-3.14□□□□□ -2.91
snR38snR38 AIM11P87275 137 aa-3.14□□□□□ -2.91
snR38snR38 YLR363W-AQ3E747 85 aa-3.14□□□□□ -2.91
snR38snR38 TRM732Q03496 1420 aa-3.15□□□□□ -2.91
snR38snR38 YCR101CP25607 182 aa-3.15□□□□□ -2.91
snR38snR38 EFG1Q3E705 233 aaKnown RBP-3.15□□□□□ -2.91
snR38snR38 SSN2P38931 1420 aa-3.16□□□□□ -2.92
snR38snR38 MSS2P40990 351 aa-3.16□□□□□ -2.92
snR38snR38 PAM16P42949 149 aa-3.16□□□□□ -2.92
snR38snR38 DNA2P38859 1522 aa-3.16□□□□□ -2.92
snR38snR38 HSK3P69852 69 aa-3.17□□□□□ -2.92
snR38snR38 SNO1Q03144 224 aa-3.17□□□□□ -2.92
snR38snR38 YBR292CP38357 123 aa-3.18□□□□□ -2.92
snR38snR38 NSL1Q12143 216 aa-3.18□□□□□ -2.92
snR38snR38 BUD4P47136 1447 aa-3.19□□□□□ -2.92
snR38snR38 RSM18P40033 138 aa-3.2□□□□□ -2.92
snR38snR38 APQ12P40532 138 aa-3.2□□□□□ -2.92
snR38snR38 MIX14Q04341 121 aa-3.2□□□□□ -2.92
snR38snR38 YLR050CQ12155 161 aaKnown RBP-3.2□□□□□ -2.92
snR38snR38 YGR201CP42936 225 aa-3.21□□□□□ -2.92
snR38snR38 YGR042WP53227 271 aa-3.21□□□□□ -2.92
snR38snR38 RPL35AP0CX84 120 aaKnown RBP-3.22□□□□□ -2.92
snR38snR38 RPL35BP0CX85 120 aaKnown RBP-3.22□□□□□ -2.92
snR38snR38 ARC19P33204 171 aaKnown RBP-3.22□□□□□ -2.92
snR38snR38 COX12Q01519 83 aa-3.22□□□□□ -2.92
snR38snR38 YPL038W-AQ3E7B4 63 aa-3.22□□□□□ -2.92
snR38snR38 STT4P37297 1900 aa-3.23□□□□□ -2.93
snR38snR38 TY1B-BRQ12193 1756 aa-3.23□□□□□ -2.93
snR38snR38 YGL204CP53089 101 aa-3.24□□□□□ -2.93
snR38snR38 YDR210WQ03482 75 aa-3.24□□□□□ -2.93
snR38snR38 HMRA2P0CY13 119 aa-3.25□□□□□ -2.93
snR38snR38 DER1P38307 211 aa-3.25□□□□□ -2.93
snR38snR38 CNL1Q06333 122 aa-3.25□□□□□ -2.93
snR38snR38 YOL118CQ08259 102 aa-3.25□□□□□ -2.93
snR38snR38 COX7P10174 60 aa-3.26□□□□□ -2.93
snR38snR38 SUI1P32911 108 aaKnown RBP-3.26□□□□□ -2.93
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms