RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C YOR105WQ08504 108 aa4.79□□□□□ -1.64
LDB19YOR322C YFR032C-BQ8TGU2 87 aa4.79□□□□□ -1.64
LDB19YOR322C YHR213WP0CI67 198 aa4.79□□□□□ -1.64
LDB19YOR322C ASK1P35734 292 aa4.79□□□□□ -1.64
LDB19YOR322C HAL1Q01766 294 aa4.79□□□□□ -1.64
LDB19YOR322C RPL21AQ02753 160 aaKnown RBP4.78□□□□□ -1.64
LDB19YOR322C RPL21BQ12672 160 aaKnown RBP4.78□□□□□ -1.64
LDB19YOR322C YLR146W-AQ2V2P1 62 aa4.78□□□□□ -1.64
LDB19YOR322C YPL038W-AQ3E7B4 63 aa4.78□□□□□ -1.64
LDB19YOR322C YPT10P38146 199 aa4.78□□□□□ -1.64
LDB19YOR322C DFG10P40526 253 aa4.78□□□□□ -1.64
LDB19YOR322C TES1P41903 349 aaKnown RBP4.78□□□□□ -1.64
LDB19YOR322C YDL242WQ07746 117 aa4.78□□□□□ -1.64
LDB19YOR322C YML100W-AQ8TGT0 57 aa4.78□□□□□ -1.64
LDB19YOR322C MZM1Q03429 123 aaPredicted RBP4.77□□□□□ -1.65
LDB19YOR322C ICY1Q04329 127 aa4.77□□□□□ -1.65
LDB19YOR322C YDR381C-AQ3E6R5 114 aa4.77□□□□□ -1.65
LDB19YOR322C MHF2Q3E829 80 aa4.77□□□□□ -1.65
LDB19YOR322C APC1P53886 1748 aa4.77□□□□□ -1.65
LDB19YOR322C RPS8AP0CX39 200 aaKnown RBP4.77□□□□□ -1.65
LDB19YOR322C RPS8BP0CX40 200 aaKnown RBP4.77□□□□□ -1.65
LDB19YOR322C FZF1P32805 299 aa4.77□□□□□ -1.65
LDB19YOR322C PCL5P38794 229 aa4.77□□□□□ -1.65
LDB19YOR322C MRPL31P14063 131 aaPredicted RBP4.76□□□□□ -1.65
LDB19YOR322C RPB9P27999 122 aa4.76□□□□□ -1.65
LDB19YOR322C FPR2P32472 135 aa4.76□□□□□ -1.65
LDB19YOR322C GPX1P36014 167 aa4.76□□□□□ -1.65
LDB19YOR322C CIS3P47001 227 aa4.76□□□□□ -1.65
LDB19YOR322C TPC1P53257 314 aa4.76□□□□□ -1.65
LDB19YOR322C YMR295CQ03559 197 aa4.76□□□□□ -1.65
LDB19YOR322C NUP192P47054 1683 aa4.76□□□□□ -1.65
LDB19YOR322C CYR1P08678 2026 aaKnown RBP4.76□□□□□ -1.65
LDB19YOR322C YEL045CP32616 141 aa4.75□□□□□ -1.65
LDB19YOR322C YGR018CP53211 109 aa4.75□□□□□ -1.65
LDB19YOR322C LSM6Q06406 86 aaKnown RBP4.75□□□□□ -1.65
LDB19YOR322C MDM35O60200 86 aa4.75□□□□□ -1.65
LDB19YOR322C PGU1P47180 361 aa4.75□□□□□ -1.65
LDB19YOR322C YER175W-AQ8TGU4 54 aa4.75□□□□□ -1.65
LDB19YOR322C YIL169CP40442 995 aa4.74□□□□□ -1.65
LDB19YOR322C YGR045CP53229 120 aa4.74□□□□□ -1.65
LDB19YOR322C MIM1Q08176 113 aa4.74□□□□□ -1.65
LDB19YOR322C FKS1P38631 1876 aaKnown RBP4.74□□□□□ -1.65
LDB19YOR322C YKR045CP36138 183 aa4.74□□□□□ -1.65
LDB19YOR322C ICS3P47034 131 aa4.74□□□□□ -1.65
LDB19YOR322C NRM1P53718 249 aa4.74□□□□□ -1.65
LDB19YOR322C USV1Q12132 391 aa4.74□□□□□ -1.65
LDB19YOR322C MRP10O75012 95 aa4.73□□□□□ -1.65
LDB19YOR322C MRPL39P36533 70 aa4.73□□□□□ -1.65
LDB19YOR322C MIX14Q04341 121 aa4.73□□□□□ -1.65
LDB19YOR322C TDA8Q6B2U8 126 aa4.73□□□□□ -1.65
LDB19YOR322C GSC2P40989 1895 aa4.73□□□□□ -1.65
LDB19YOR322C SMT3Q12306 101 aaKnown RBP4.73□□□□□ -1.65
LDB19YOR322C YER187WP40102 141 aa4.72□□□□□ -1.65
LDB19YOR322C YFL012WP43580 148 aa4.72□□□□□ -1.65
LDB19YOR322C PAU2P32612 120 aa4.72□□□□□ -1.65
LDB19YOR322C VTC1P40046 129 aaRIP-Chip data4.72□□□□□ -1.65not detected
LDB19YOR322C SWT21P53873 357 aaPredicted RBP4.72□□□□□ -1.65
LDB19YOR322C YDR274CP87283 123 aa4.72□□□□□ -1.65
LDB19YOR322C YPR117WQ06116 2489 aa4.72□□□□□ -1.65
LDB19YOR322C YCR025CP25352 136 aa4.71□□□□□ -1.66
LDB19YOR322C DSE2P38844 325 aa4.71□□□□□ -1.66
LDB19YOR322C IGO1P53897 168 aa4.71□□□□□ -1.66
LDB19YOR322C YLR346CQ06139 101 aa4.71□□□□□ -1.66
LDB19YOR322C YMR030W-AQ3E760 96 aa4.71□□□□□ -1.66
LDB19YOR322C BPH1P25356 2167 aa4.71□□□□□ -1.66
LDB19YOR322C YAR068WP39564 161 aa4.7□□□□□ -1.66
LDB19YOR322C YEL028WP39989 153 aa4.7□□□□□ -1.66
LDB19YOR322C PAU12P53343 120 aa4.7□□□□□ -1.66
LDB19YOR322C PIR1Q03178 341 aa4.7□□□□□ -1.66
LDB19YOR322C RPL42AP0CX27 106 aaKnown RBP4.7□□□□□ -1.66
LDB19YOR322C RPL42BP0CX28 106 aaKnown RBP4.7□□□□□ -1.66
LDB19YOR322C RSM18P40033 138 aa4.7□□□□□ -1.66
LDB19YOR322C COX12Q01519 83 aa4.7□□□□□ -1.66
LDB19YOR322C YIL014C-AQ02598 104 aa4.7□□□□□ -1.66
LDB19YOR322C FYV12Q08559 129 aa4.7□□□□□ -1.66
LDB19YOR322C YBR209WP38311 105 aa4.69□□□□□ -1.66
LDB19YOR322C YFL015CP43578 164 aa4.69□□□□□ -1.66
LDB19YOR322C FSH2Q05015 223 aa4.69□□□□□ -1.66
LDB19YOR322C MET32Q12041 191 aa4.69□□□□□ -1.66
LDB19YOR322C EDC2P40023 145 aaPredicted RBP4.69□□□□□ -1.66
LDB19YOR322C LPP1Q04396 274 aa4.69□□□□□ -1.66
LDB19YOR322C RIM15P43565 1770 aa4.68□□□□□ -1.66
LDB19YOR322C RPS14AP06367 137 aaKnown RBP4.68□□□□□ -1.66
LDB19YOR322C PTH1P38876 190 aaKnown RBP4.68□□□□□ -1.66
LDB19YOR322C PCP1P53259 346 aa4.68□□□□□ -1.66
LDB19YOR322C NUM1Q00402 2748 aa4.68□□□□□ -1.66
LDB19YOR322C PAU1P0CE88 120 aa4.68□□□□□ -1.66
LDB19YOR322C PAU14P0CE89 120 aa4.68□□□□□ -1.66
LDB19YOR322C PAU6P0CE90 120 aa4.68□□□□□ -1.66
LDB19YOR322C PAU18P0CE91 120 aa4.68□□□□□ -1.66
LDB19YOR322C PAU8P0CE92 120 aa4.68□□□□□ -1.66
LDB19YOR322C PAU11P0CE93 120 aa4.68□□□□□ -1.66
LDB19YOR322C ATP15P21306 62 aa4.68□□□□□ -1.66
LDB19YOR322C YBL059WP34224 193 aa4.68□□□□□ -1.66
LDB19YOR322C PAU13P38725 120 aa4.68□□□□□ -1.66
LDB19YOR322C PAU10Q03050 120 aa4.68□□□□□ -1.66
LDB19YOR322C YMR181CQ03231 154 aa4.68□□□□□ -1.66
LDB19YOR322C PAU20Q08322 120 aa4.68□□□□□ -1.66
LDB19YOR322C PAU9Q3E770 120 aa4.68□□□□□ -1.66
LDB19YOR322C FIG2P25653 1609 aa4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms